Acaryochloris marina: AM1_5562
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Entry
AM1_5562 CDS
T00617
Name
(GenBank) long-chain-fatty-acid-CoA ligase, putative
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
amr
Acaryochloris marina
Pathway
amr00061
Fatty acid biosynthesis
amr00071
Fatty acid degradation
amr01100
Metabolic pathways
amr01212
Fatty acid metabolism
amr02024
Quorum sensing
amr04146
Peroxisome
Module
amr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
amr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
AM1_5562
00071 Fatty acid degradation
AM1_5562
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AM1_5562
09145 Cellular community - prokaryotes
02024 Quorum sensing
AM1_5562
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
amr01004
]
AM1_5562
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amr04147
]
AM1_5562
Enzymes [BR:
amr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
AM1_5562
Lipid biosynthesis proteins [BR:
amr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
AM1_5562
Exosome [BR:
amr04147
]
Exosomal proteins
Exosomal proteins of breast milk
AM1_5562
Exosomal proteins of breast cancer cells
AM1_5562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ABW30516
UniProt:
B0CE42
LinkDB
All DBs
Position
complement(5613037..5614977)
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AA seq
646 aa
AA seq
DB search
MSVGHPPHPSETVKLEYNQLQSISEIWPIAAQRFGEIVALRDPHVKPEVNLTYVELNRQV
QRFAASLQALGVKPGDRVALFADNSSRWFIADQGSIMAGAVNVVRSSQASPEELVYILEN
SGATYLLVEDAATLSKLQPFLTKLPLKLVALLSDEDVANNGQSQVLNFPQIFQEGTHGAV
RAVPLDREHLATLIYTSGTSGKPKGVMLSHGNLLHIITAMPAAVQPEVGDRILSILPTWH
SFGRLVDYYFLSQGCTQIYTSIRNLKGDLQTYKPHYMGSVPRLWESLYEGMQKKFRGEPA
TRQKLINTFFGISQKYILARRTQQGLDINNLNPSGLQRFLAQLQMLFLGPLHQLGDRIVY
TKIRQAMGGQFKQSFSGGGSLAMHLETFFEAVGIELIVGYGLTETSPVLTSRRAEHNLRR
SAGKPIPKTEIRIVDPQTRQTLPTGQQGLVIVRGPQVMQGYYQNPEATAKVIDQEGWFDT
GDLGWLTPTQDLVLTGRAKDTIVLSNGENIEPQPLEDACARSSFIDQIMVVGQDQRSLGA
LIVPNLDALQQWASEQNASIQHPGNTPTPGSKVLTFTDQPIQDLYRQELTREVKNRPNYR
PDERIGPFAFALEAFSIENGMLTQTLKVRRRVVMEHYRDMINGMFK
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttggccatcctccacatccttcagaaaccgtgaagttggaatataaccagtta
cagtctatttctgaaatatggccgattgctgcccagcgatttggggaaattgtggccctt
cgagatccccatgtcaaaccagaagtcaatctcacctatgtggaattgaatcgccaagtc
caacggttcgctgctagtttacaggcattaggggttaaacctggcgaccgcgttgcttta
tttgccgataatagctctcgttggtttatcgccgatcaaggcagcattatggcaggggcc
gtcaatgtggtccgtagttcccaagctagcccagaggagcttgtctacattctggaaaac
agtggggcgacctatttactggttgaagatgcagcaacattaagtaagttacaacccttc
ctaacaaaactacccttaaagttagtggccttgctttccgatgaagacgtggcaaacaac
ggtcaatcccaggtattgaacttcccccaaatcttccaagaaggaactcacggagctgtt
cgtgcggttccgttggatcgagaacatttagcgacactgatctatacctctggtaccagt
ggtaaacccaaaggtgtcatgctgagtcatggcaacctactccatatcattacagccatg
ccagcggcggttcagccagaagtgggggaccgcattctcagtatcctccccacctggcat
tctttcggccgattggtagattactactttctgtcccaagggtgcacgcaaatctatacc
agtattcgaaatctcaaaggagatttgcaaacctataaacctcactatatgggcagtgtg
ccacgcttatgggagtccctttacgaagggatgcagaaaaagtttcggggcgaacctgcc
actcgtcaaaaactaatcaatacgttttttgggatcagccagaaatacattctggcccgc
cggactcagcaagggctggacattaataatctcaatccgtcagggctacaacggtttctg
gctcaactgcagatgcttttcctaggtccattgcatcaattgggcgatcgcatcgtttat
accaagatcagacaagccatgggcgggcaattcaagcagtcgtttagtggcggtggctcc
ttagccatgcacctggaaaccttttttgaagccgtcggcattgaactgattgtaggctat
ggattaacggagacctcaccggtcttgacttctcgtcgcgcggaacacaatttgcgccgc
tcagcaggcaagcccattcccaagaccgaaattcgaattgttgatcctcaaactcgtcaa
accttaccgacaggtcaacaaggtctcgttatcgtccgaggacctcaagtcatgcagggg
tactaccaaaatcctgaagcgactgctaaagtgatcgatcaagaaggctggtttgatacc
ggggatttaggttggttgacgcctacacaagatttggttctaaccggacgagccaaagat
accattgtgctctccaacggtgaaaatattgagccgcaacccctggaagacgcctgtgcc
cgcagctccttcattgaccaaatcatggtggttggtcaagatcaacgaagtctgggggcc
ttaattgttcctaatctcgatgcattgcagcagtgggcatcagagcaaaatgcctctatt
caacaccccggtaatactcccacgccagggagtaaagtacttacctttaccgatcagccc
atccaagatctctatcgccaggaactcacacgagaagtcaaaaatcgaccaaactaccgc
ccagatgagcgcattggtccctttgcctttgccttagaagcattttccatcgaaaatgga
atgcttacacaaaccctaaaagttcgtcgtcgtgttgtcatggagcattaccgcgatatg
atcaacggaatgtttaaatag
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