Acaryochloris marina: AM1_5906
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Entry
AM1_5906 CDS
T00617
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
amr
Acaryochloris marina
Brite
KEGG Orthology (KO) [BR:
amr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amr03032
]
AM1_5906 (hup)
03036 Chromosome and associated proteins [BR:
amr03036
]
AM1_5906 (hup)
03400 DNA repair and recombination proteins [BR:
amr03400
]
AM1_5906 (hup)
DNA replication proteins [BR:
amr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AM1_5906 (hup)
Chromosome and associated proteins [BR:
amr03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
AM1_5906 (hup)
DNA repair and recombination proteins [BR:
amr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
AM1_5906 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
VWA_3
Motif
Other DBs
NCBI-ProteinID:
ABW30845
UniProt:
B0C1L1
LinkDB
All DBs
Position
complement(5966881..5967162)
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AA seq
93 aa
AA seq
DB search
MNKGELVDAVADKASVTKKQADAVLTAALEAIVESVSSGEKVTLVGFGSFEPRERKAREG
RNPKTGAKMKIPATKVPAFSAGKLFKEKVAPKK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaggagaactcgtcgacgccgttgctgataaggcaagtgtcacgaaaaagcag
gcagatgcagttctgactgccgccttagaggccattgttgaatctgtctcatcaggagaa
aaagtcacattggtgggatttggctcatttgaacctcgcgaacgcaaggcccgggaagga
cgtaaccccaagaccggtgcgaaaatgaagattcccgcaactaaagttccagctttctct
gcaggtaagctatttaaggaaaaagttgctcctaaaaagtaa
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