KEGG   Acaryochloris marina: AM1_6173
Entry
AM1_6173          CDS       T00617                                 
Symbol
hup
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
amr  Acaryochloris marina
Brite
KEGG Orthology (KO) [BR:amr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:amr03032]
    AM1_6173 (hup)
   03036 Chromosome and associated proteins [BR:amr03036]
    AM1_6173 (hup)
   03400 DNA repair and recombination proteins [BR:amr03400]
    AM1_6173 (hup)
DNA replication proteins [BR:amr03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    AM1_6173 (hup)
Chromosome and associated proteins [BR:amr03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    AM1_6173 (hup)
DNA repair and recombination proteins [BR:amr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      AM1_6173 (hup)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_1 Transposase_mut HU-CCDC81_euk_2 HU-DNA_bdg HU-CCDC81_bac_2
Other DBs
NCBI-ProteinID: ABW31105
UniProt: B0C4W7
LinkDB
Position
complement(6245483..6245758)
AA seq 91 aa
MNKADLVDSIVEKSGTTKKQADTILSALTETIIDSVSSGEKVTLVGFGSFEARDRKARNG
RNPQTGKQLKIPATKAPVFSAGKDFKEKVRD
NT seq 276 nt   +upstreamnt  +downstreamnt
atgaataaagctgatttagtggattctattgttgagaagtctggaacgactaagaaacag
gccgataccatactctcagcattaacggagacaattatcgatagtgtgagttctggtgaa
aaggtcactctcgtgggcttcggtagctttgaggccagagatcgcaaagcccggaatggg
cggaatcctcaaacggggaaacagcttaagatcccagcaactaaagcccctgtgtttagt
gctggcaaagactttaaggagaaggtcagagactaa

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