Acaryochloris marina: AM1_B0413
Help
Entry
AM1_B0413 CDS
T00617
Name
(GenBank) helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
amr
Acaryochloris marina
Pathway
amr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AM1_B0413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amr03400
]
AM1_B0413
Enzymes [BR:
amr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AM1_B0413
DNA repair and recombination proteins [BR:
amr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AM1_B0413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
HHH_5
AAA_11
Viral_helicase1
PIF1
nSTAND3
PhoH
SLFN-g3_helicase
Helicase_RecD
AAA_22
UvrD-helicase
TraI_hel_assoc_N
DNA_pol_lambd_f
HHH_2
DEAD
NPHP3_N
Mg_chelatase
TsaE
UvrD_C
AAA_16
AAA
T2SSE
AAA_5
NACHT
Sigma54_activat
AAA_28
TrwB_AAD_bind
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
ABW32131
UniProt:
A8ZLV4
LinkDB
All DBs
Position
pREB2:complement(349158..351419)
Genome browser
AA seq
753 aa
AA seq
DB search
MPSSSAHPGSPPIEQLQGVVERLTFHSDESGYTVARLKAPRTRELITIVGSFANIQAGQT
LQLQGIWRDHPKYGPQFQVKQYKETKPATLTGIEKYLGSGLIKGVGPVTAKRIVAHFGLD
TLDIIETHIERLIEVPGIAKKRVKLIQTALDSQKAIKEVMVFLQGHGVSTTYAVKIFKQY
GDESIETVTHNPYRLATDVYGIGFVTADEIARSLGISPHSEYRYRSGLLHVLSESAEEGH
CYLPQPELIDRAVKRLALPDYQPKPDQVEYLIHAMISDAELIVERLTHEGSTKLLCYAPP
FFQAEFHLSRRVLQLLASSLVVDNERVRAWLDRFMAQTDVSLSKQQQQAVEMAASQRVVI
LTGGPGTGKTFTTRTIVALWKAMGKDIVLASPTGRAAQRLSEVTGHEAKTIHRLLEFDPK
TMKFQRNSDNPIPADAVVIDEASMLDLFLANSLIKAIDTNAQLLLVGDTDQLPSVGPGNV
LLDLITSGRIPIIELTEVFRQAQASHIIRNAHRINQGQFPNLESVSPSPKTDCLWLGAPE
PENGVQAIQELINDLLPELGFQPARDVQVLCPMTRGEVGTRKLNQVLQALINPPCPDKPE
LTRGGLILRVGDRVLQQVNDYNREVFNGDMGVIEDINLEEIEVTVHYAERSVSYDLADLN
EIGLAWAVTIHKSQGSEYPVVILPLYMQHYIMLSRNLLYTGLTRAKKLAILVGPKNAISM
AIRQIKDRQRYTLLERRLGGVPKANESLASAIL
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgcccagtagttctgctcatccagggtctcctcccattgaacaactacagggggttgtg
gagcgattgaccttccattctgatgagtcaggttataccgttgctcgcctcaaagcaccc
cgaacccgtgaattaattaccatcgtgggcagcttcgccaatatccaagcaggccaaacg
cttcaactccaggggatatggcgggaccatcctaagtacggtcctcaattccaggtcaaa
cagtataaggaaacaaagccagcgactctcacgggcattgagaaatacctcggcagtggc
ttaatcaagggcgtgggtcccgtgacggcaaaacgcatcgtagctcactttgggctagat
accctcgatattattgaaacccatattgaacgattgattgaagtccctggtatcgccaaa
aagcgcgtcaaactgattcagactgccttggatagtcagaaggcaatcaaagaagtcatg
gtctttctccaagggcatggcgtatccaccacttatgccgtcaagatcttcaagcagtat
ggggatgagtccattgaaaccgtcacccataacccctatcgactggcaacagatgtctat
ggcattggatttgtgaccgcagatgagattgctcgcagtcttggcatctcacctcattct
gaataccgctatcgaagtggtctgctacatgtcttgagtgaatccgcagaagaagggcat
tgttatttgcctcaaccagaattgattgatcgagcggtgaagagattagctctccctgac
tatcagcccaaacccgatcaagtggagtacttgatccatgccatgatctctgatgctgag
ctaatcgtcgaacggttaacacatgagggctcgacgaaactgctttgctacgcacctccc
ttcttccaagcagaatttcacttgtctcgacgagtcctccagctgctggccagctctcta
gttgtcgataatgaacgggtaagggcttggttagaccgcttcatggctcaaacagatgtg
agtctctcaaaacagcagcagcaagccgtggaaatggcagcgagtcagcgtgttgtgatc
cttacgggtggacccggaacggggaagacttttaccacccgcacaatcgtagcgctctgg
aaagcaatggggaaagacatcgtattagcatccccgacaggtcgagccgcgcaacgcctc
agtgaagtgacgggtcatgaagcaaaaacgattcatcgcctcttggaatttgaccccaag
acaatgaagtttcaacggaactcagataacccgatccccgctgacgcagtggtgattgat
gaagcctccatgctggatctgttcttagccaattccctgatcaaggctattgataccaac
gctcaactcttgctcgtgggggatacagaccagttacctagtgtgggaccaggaaacgtc
ctattagatctgataacctctgggagaattcccattattgaactaacggaggtctttcgt
caggcccaagccagtcacatcatccgtaacgcccatcgcattaatcaaggccagtttccc
aacttggaatccgtaagtccttcgcccaaaacagattgtctctggttaggtgcccccgaa
cctgagaacggtgtgcaagcgatccaggaactgatcaacgatcttctccctgaacttggg
ttccagccagcacgagatgtgcaagtcctatgccccatgacgaggggcgaagtcggtact
cgtaaactcaatcaagtgttgcaagctttgattaatcctccttgccccgataagcctgag
ttgacgagaggaggtctgatactcagggtgggagatcgtgttctgcagcaggtcaatgat
tacaaccgagaagtattcaacggcgatatgggagtgatcgaggatatcaatttagaagag
attgaggtcaccgttcactatgcagaacgctccgtttcctatgatctcgctgacttgaat
gaaattggcttagcctgggccgtcacaatccataagagccaggggtcggaatatcccgtc
gtcattctgcccctgtacatgcagcattacattatgctcagccgtaacttgctctatacc
ggactgacacgggcgaagaaactggcgattctcgtaggccccaagaatgccatcagcatg
gccatcaggcagatcaaagataggcaacgatacaccttgcttgagcggcgtttgggaggt
gttcccaaggccaacgaatcactagcttccgcaattctttaa
DBGET
integrated database retrieval system
