Acaryochloris marina: AM1_D0029
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Entry
AM1_D0029 CDS
T00617
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
amr
Acaryochloris marina
Brite
KEGG Orthology (KO) [BR:
amr00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AM1_D0029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amr03021
]
AM1_D0029
Transcription machinery [BR:
amr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AM1_D0029
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
Sigma70_r2
CHD1-like_C
UPF0122
Flu_PB2_1st
Motif
Other DBs
NCBI-ProteinID:
ABW32526
UniProt:
A8ZNE0
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Position
pREB4:22553..23875
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AA seq
440 aa
AA seq
DB search
MNKGTGLRPPPDIIATMARYPDLSPEREAELIIKAQNGDYEARQTVIYSNLAWICSRGGQ
FSRKGIDDGELINEGYWGLNRAIDQWDPTKGANLRTYSERKIYKFQSEAIRQKNHIRLPK
STYEQLSKLKKATESLGEDATVAQLAEETEIKEKRIRKLQEISQPVSLNSVTGERENLEL
LDQQADDSLGSLDPALSSELLDLVDKLHPRQREILHLYHWEELSFQKISDYLGLPAKQVR
KLYKKALDLLRKFLQGEINEFPPLPLLEWRNFIFAKFFLATGLSQIFNIVVAKLKRLKRL
HRNNHIATVQSQLTVSQSTTEVLPASGPECAIQAPAEPSTQYSAWYERLWQFVNRDKPTH
SRVNTHQIDSGGLRDGPKYLVDTFWHGLNCIAQFLGYWPGSPRGSDQYRCRSGDRWRCRG
QTEGRYSKKKVIRIVGNPTF
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaggcactggacttcgaccaccacccgacatcatcgccactatggcgcgatac
cctgacctatctccagagcgagaagctgaactgatcattaaagctcagaacggggattac
gaagctaggcaaaccgtgatttactctaatcttgcctggatttgttctaggggagggcaa
ttttcccgaaaagggatagatgacggtgagttgatcaacgaagggtattggggattaaac
cgggcgattgatcaatgggatcctaccaaaggtgccaatttacgcacctatagcgaaaga
aagatctataagtttcaatctgaagctatccgtcaaaaaaatcatatccgactgcccaaa
tcaacctatgagcagctttctaagttgaagaaagcaactgaatccttgggtgaggatgcc
actgttgcccagctagcagaagaaaccgagattaaagagaagcgaatcaggaaattacaa
gagatatctcagcccgtttccctgaatagtgtcacgggggagcgagagaaccttgagcta
ctggatcagcaagcggatgattccctaggaagcctagatcccgctctctcatcagaacta
ttggatttagtggacaagctacacccacgccagcgggaaatattgcacctgtatcactgg
gaggaactgtcttttcaaaagatcagtgattatctgggtctacccgcaaaacaggtgcgg
aaactctacaagaaagctttggatcttctgcggaagttccttcaaggtgagattaacgaa
ttcccacctctccccttgctagaatggcgcaattttatctttgccaaattctttcttgca
actggattatcccaaatattcaatatcgttgttgccaaactaaaacgcctgaagcgtctc
catcggaataaccacattgcaaccgtccaatcgcaactgaccgtatctcaaagcactaca
gaggtattgccagcatcaggtcctgaatgtgccattcaagcaccagcagaaccctcaact
caatactctgcttggtatgagaggctatggcaattcgtgaatcgtgataaacccactcat
tcacgagtaaatactcatcagattgattcaggaggattaagggatggtccgaaatatctt
gtggacactttttggcatggccttaactgtattgctcaattcctggggtattggcccgga
tcgcctcgcggaagtgatcaataccgatgccgcagcggagatcgctggagatgtcgggga
caaactgaaggacgttactcaaaaaagaaagtaatacggatagttgggaatccaactttt
tag
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