KEGG   Acaryochloris marina: AM1_D0029
Entry
AM1_D0029         CDS       T00617                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
amr  Acaryochloris marina
Brite
KEGG Orthology (KO) [BR:amr00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    AM1_D0029
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:amr03021]
    AM1_D0029
Transcription machinery [BR:amr03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AM1_D0029
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r4_2 Sigma70_r3 Sigma70_r2 CHD1-like_C UPF0122 Flu_PB2_1st
Other DBs
NCBI-ProteinID: ABW32526
UniProt: A8ZNE0
LinkDB
Position
pREB4:22553..23875
AA seq 440 aa
MNKGTGLRPPPDIIATMARYPDLSPEREAELIIKAQNGDYEARQTVIYSNLAWICSRGGQ
FSRKGIDDGELINEGYWGLNRAIDQWDPTKGANLRTYSERKIYKFQSEAIRQKNHIRLPK
STYEQLSKLKKATESLGEDATVAQLAEETEIKEKRIRKLQEISQPVSLNSVTGERENLEL
LDQQADDSLGSLDPALSSELLDLVDKLHPRQREILHLYHWEELSFQKISDYLGLPAKQVR
KLYKKALDLLRKFLQGEINEFPPLPLLEWRNFIFAKFFLATGLSQIFNIVVAKLKRLKRL
HRNNHIATVQSQLTVSQSTTEVLPASGPECAIQAPAEPSTQYSAWYERLWQFVNRDKPTH
SRVNTHQIDSGGLRDGPKYLVDTFWHGLNCIAQFLGYWPGSPRGSDQYRCRSGDRWRCRG
QTEGRYSKKKVIRIVGNPTF
NT seq 1323 nt   +upstreamnt  +downstreamnt
atgaacaaaggcactggacttcgaccaccacccgacatcatcgccactatggcgcgatac
cctgacctatctccagagcgagaagctgaactgatcattaaagctcagaacggggattac
gaagctaggcaaaccgtgatttactctaatcttgcctggatttgttctaggggagggcaa
ttttcccgaaaagggatagatgacggtgagttgatcaacgaagggtattggggattaaac
cgggcgattgatcaatgggatcctaccaaaggtgccaatttacgcacctatagcgaaaga
aagatctataagtttcaatctgaagctatccgtcaaaaaaatcatatccgactgcccaaa
tcaacctatgagcagctttctaagttgaagaaagcaactgaatccttgggtgaggatgcc
actgttgcccagctagcagaagaaaccgagattaaagagaagcgaatcaggaaattacaa
gagatatctcagcccgtttccctgaatagtgtcacgggggagcgagagaaccttgagcta
ctggatcagcaagcggatgattccctaggaagcctagatcccgctctctcatcagaacta
ttggatttagtggacaagctacacccacgccagcgggaaatattgcacctgtatcactgg
gaggaactgtcttttcaaaagatcagtgattatctgggtctacccgcaaaacaggtgcgg
aaactctacaagaaagctttggatcttctgcggaagttccttcaaggtgagattaacgaa
ttcccacctctccccttgctagaatggcgcaattttatctttgccaaattctttcttgca
actggattatcccaaatattcaatatcgttgttgccaaactaaaacgcctgaagcgtctc
catcggaataaccacattgcaaccgtccaatcgcaactgaccgtatctcaaagcactaca
gaggtattgccagcatcaggtcctgaatgtgccattcaagcaccagcagaaccctcaact
caatactctgcttggtatgagaggctatggcaattcgtgaatcgtgataaacccactcat
tcacgagtaaatactcatcagattgattcaggaggattaagggatggtccgaaatatctt
gtggacactttttggcatggccttaactgtattgctcaattcctggggtattggcccgga
tcgcctcgcggaagtgatcaataccgatgccgcagcggagatcgctggagatgtcgggga
caaactgaaggacgttactcaaaaaagaaagtaatacggatagttgggaatccaactttt
tag

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