Acaryochloris marina: AM1_D0087
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Entry
AM1_D0087 CDS
T00617
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
amr
Acaryochloris marina
Brite
KEGG Orthology (KO) [BR:
amr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amr03032
]
AM1_D0087 (topA)
03400 DNA repair and recombination proteins [BR:
amr03400
]
AM1_D0087 (topA)
Enzymes [BR:
amr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AM1_D0087 (topA)
DNA replication proteins [BR:
amr03032
]
Prokaryotic type
DNA Topoisomerases
AM1_D0087 (topA)
DNA repair and recombination proteins [BR:
amr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AM1_D0087 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_FGT1_2
HSNSD_N
Motif
Other DBs
NCBI-ProteinID:
ABW32582
UniProt:
A8ZNJ6
LinkDB
All DBs
Position
pREB4:complement(77863..80007)
Genome browser
AA seq
714 aa
AA seq
DB search
MSRLLIVESPGKIKKLRSILGPGWNVQASVGHIRQLANEGTDNLGFVAENGKIKCRYEPR
DDRAKKTIANLKAAAQQADEIFIASDPDREGEVIGWHVAQVLGLKQPKRVVYQEITERAV
RQAISNPKSLDMDLVEAGRCRDCLDKLVGYRGSPLVWRLNNGAKSVGRVQSATLHLVCQR
EREIQAFVPQDYWSVFVDYAEGFRAYYHGSTQANGQDEHSIDDSGSETKTEESTRVLSQA
EADSLVAIARSNPHQVISIEGKITPKKPPAPFTTSALQQAAGSRLKFSPEQTMQVAQKLY
EAGLITYMRTDSVALSPDYCLAAKRWLEQNDADNVPKKVSKQKVSKQAQEGHEAIRPTDI
FKPSAELKQALPDDQFKLYVLIWTRALASQCKPAQIRKTIVISQSGEIQWKAKGNLVEFK
GYSKYWKDIKADTELPTLQEQQPLTLAQADSQQKQTQPPSRYSEPKLVQLMEKKGIGRPS
TYAPTIKTIKSRGYVTLIKGRLQPTSMGLEVDQFMGGALPELLEAEFTAQMESSLDAISE
GNQEWQDYLIGWNRSYFAPALAKAKQGLPEPTSYGSNGGKALQKSRTKCPKCSQPMGKVP
SKKVKKGHFLKCEDGCTADDGRGLVMFWSDRDKSWQLPKAKSDQPTAPAELTDYPCPVCK
AKLEIYRYEKDSQPKQMLRCSDPKARTNKKHKNAVYFASKGRWWSPKYGELETE
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccttttaatcgttgagtcccccggcaaaatcaagaaactgcgctccatcctc
ggtccaggctggaatgtccaggcatcggttggacatatacggcaattggcaaatgaaggc
accgacaatcttggttttgttgctgaaaacggcaaaattaaatgccgctacgaacccaga
gatgaccgggcgaaaaagaccatagccaatctcaaggccgcagcccagcaagccgacgag
attttcattgcctccgaccccgaccgggaaggcgaggttatcggttggcatgttgcccag
gtgctaggtctcaagcagcccaagcgggttgtctatcaggaaatcacagaacgagccgtt
agacaggccatctctaacccaaaatcgctagacatggatttagttgaggctggtcgttgc
agagactgcctcgataaactcgtggggtatcgtggctctcccttagtctggcgactgaac
aatggggccaaatcagtaggccgagtccaatcagcgacccttcatttagtttgccagcga
gagcgggagatacaagcctttgttccccaggattattggtcggtcttcgtggattacgcc
gagggcttcagggcttactatcacggaagcacccaagcaaacggccaggacgaacacagc
attgatgattctggttcagagaccaaaaccgaagaatccacacgagtgctttcccaggct
gaggccgattccttggttgcgatcgcacgtagcaaccctcatcaggtcatctctatcgag
ggcaaaatcacacccaagaagccccctgctcccttcaccacctcagccttacagcaggcc
gcaggttcacgtctcaagttcagtccagagcagaccatgcaggttgctcaaaagctttat
gaggctggcttaattacctatatgagaaccgattctgtcgcgctgtccccagactactgc
ttagcggccaagcgatggctggagcagaatgacgctgataatgtccccaagaaagtatcc
aagcagaaggtctcaaagcaagcccaggaagggcacgaggctattcgacccacggacatc
ttcaaaccctccgcagaactgaagcaagcgctacccgacgatcagttcaagctgtatgta
ttgatttggacacgggctttagcctcccaatgcaaacccgctcagatccgaaagaccatt
gtcatcagtcaatctggcgagattcaatggaaagctaaggggaatctcgtggaattcaag
ggctactcgaaatactggaaagacatcaaggccgatactgagctgcccactcttcaggag
caacagcccctcaccctggcccaggccgattctcagcagaagcagacccagcccccctct
cggtacagtgaaccgaagttggtgcaactgatggagaagaaagggattggccgaccatcc
acctatgcccccacgatcaagaccatcaaaagccgtggctatgtgacgcttatcaaaggc
agactccaaccgacttctatgggccttgaggttgaccagttcatgggtggggcgctccct
gagttattagaggctgaattcacggctcagatggagagttccttggatgcgatctcagaa
gggaatcaggaatggcaagactatttgatcggctggaatcggagctactttgctccagcc
ctggctaaggctaagcaaggtttacccgaacccacctcttacggcagtaatggggggaag
gctttgcagaagtccagaaccaagtgccctaaatgtagccagcctatgggcaaagtgccc
agcaagaaggtcaaaaaggggcatttcctcaagtgtgaggacggctgcacggctgatgat
ggtcggggtctggtgatgttctggtctgaccgggacaagagctggcaattaccaaaagcc
aaatctgaccagcccaccgcaccagcagaactgacggattacccatgcccagtttgcaag
gcgaagctggagatttataggtacgagaaggatagtcagcccaagcaaatgctcaggtgt
tctgacccaaaggcaaggactaataaaaagcataagaatgccgtttattttgccagcaag
ggacggtggtggagtccgaaatatggggagttggaaacagagtaa
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