Anopheles marshallii: 128707723
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Entry
128707723 CDS
T10928
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoporin Ndc1
KO
K14315
nucleoporin NDC1
Organism
amrs Anopheles marshallii
Pathway
amrs03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
amrs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128707723
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amrs03019
]
128707723
Messenger RNA biogenesis [BR:
amrs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128707723
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
128707723
NCBI-ProteinID:
XP_053658657
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Position
2:52064167..52066115
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AA seq
617 aa
AA seq
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MQANFQSARPLLXFPGIKQVNSGVAIFRHLFCNXKLQTPGMDPVGSKDLAFRKICTERFI
LSICYSLLQQYLLVTIFLLFINFSILHPISWIIGTVRLLVSFYPWIASVPLAVAVTVHGI
VLAKSCLLESRYHSTYFLKLYRDLIQRSVLLLTNGTIGCLTAWLYTRFLRDDYRLLFLTS
EQDESEFLNDRFIYLLMSGVFSGSYYFVREQPNPGAVDFPIILLPKVAQYWNNLSSVLTK
SMRKSVVGMFIYMSFYYTFSCLFRQKLASLGGVKLYCDSTLYSFCNIVMDIRLLVYTWLF
STLILSNIHLMHVLFRIFLTEPQNFNLETSIFQTNDEPLLADALAYKQIPIVQQLASEDL
YTMSEAQDSIRRKQLFALTVPGGHPNNWRRVYEVCMKLIGDFTQELNYSIDGIEPKPAPP
MVLMGGVLRPTASMDKENFMKKQYNQNFGIRSLSTPTLATPNGTSESHAKSHGKAVDQVI
SLVMAVKRIPGYDFLFVESKSAKSYYLLSIQSQLIAKVTQSLVAIASRSLAEDTYGVLQT
DLPCIVHTLLELKKVVDKIGLINLDVKRVDRNYIALKGAVKKSLYRFTTAFGPYIKHLVI
EPEDVKALQAFVNFREV
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcgaactttcaatccgcgcgccctttgttgnttttccccggcatcaaacaagta
aattctggagtcgctatttttcgtcatttattctgcaattagaaactacagacgccggga
atggatccggtcggttcgaaagatttggcttttcgtaaaatctgcacagagcgtttcatc
ttgtcgatatgctacagcctgttgcaacagtatttgctagtgacgatatttctgctgttt
atcaacttcagtatcctgcaccccataagctggatcatcggaacagtgcgcctgcttgtc
tcgttctatccctggattgcttcggttccgctggctgtagccgtgaccgtacatggaata
gtgttggctaaatcgtgcctattagaatcacggtaccattcaacgtactttctcaaattg
tatcgtgacctcatacaacggtcggtacttttactcacaaacggaaccatcgggtgcttg
accgcttggttatacacacgatttttgcgagacgattatcggcttttgttcttgacttcc
gagcaagatgagtctgagtttctcaacgaccgtttcatttatttgctaatgagtggagtg
ttcagtggaagttattattttgtaagggaacaaccaaacccgggtgcagtagatttcccg
atcattcttctaccaaaagtggcacaatattggaacaatctaagcagtgttttaacgaaa
tcgatgcgaaaatcagttgtgggcatgtttatttacatgagtttctactacacattttcc
tgtctatttagacaaaaactggcttctcttggaggagtaaaactctattgtgactctact
ttgtacagtttctgcaatatcgtgatggatattcgactgttggtgtacacctggctattt
tcaaccctaattctgagcaacatacatctgatgcatgtactgtttcgtatttttctaacc
gaaccccaaaacttcaaccttgagacaagcatttttcaaacaaatgatgaacctctactc
gcggacgccttggcctataagcaaattccaattgtacagcaactggcaagtgaagatctg
tatactatgtccgaagcacaagacagcattcgacgtaaacaattgttcgcgttgacagtg
cctggaggtcatcccaataattggaggagggtatacgaagtgtgcatgaagttgattggg
gattttacacaggagttgaattactcgattgacgggatcgagccgaaacctgcaccacct
atggttttgatgggaggagttctgcgcccaacggcatcgatggacaaagagaacttcatg
aagaagcagtacaaccaaaactttggtattcgcagcttatcaacaccaacgttggccacc
ccaaacgggacttccgaaagtcatgcaaaatctcacggcaaggcggtggatcaagtcatc
tcgttagtcatggcggtgaagcgtatacctggatatgatttcctgttcgtcgaatctaaa
tcagccaaaagctactatctgctctccattcaatcacaactgatagcgaaagtaacgcaa
agcttggtagctattgccagccgttctcttgccgaggacacgtacggtgttttgcaaacc
gatttaccatgcatcgtccatacgttgttggaattgaaaaaggtcgtcgataaaatcggt
ctaatcaatttggatgtcaagagagtcgatcggaactatatcgccctgaaaggtgctgta
aagaaaagtctgtacagatttaccacagcattcggaccgtacattaagcatcttgtaatc
gaaccagaagatgtaaaggcgctacaggctttcgtgaacttccgtgaagtttga
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