Anopheles marshallii: 128709699
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Entry
128709699 CDS
T10928
Name
(RefSeq) collagen alpha-1(I) chain-like
KO
K19719
collagen type II alpha
Organism
amrs Anopheles marshallii
Pathway
amrs04512
ECM-receptor interaction
Brite
Glycosaminoglycan binding proteins [BR:
amrs00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
128709699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
TILa
Motif
Other DBs
NCBI-GeneID:
128709699
NCBI-ProteinID:
XP_053660683
LinkDB
All DBs
Position
2:complement(87313490..87318590)
Genome browser
AA seq
1555 aa
AA seq
DB search
MKFRLGRPLLLAVFFIIVIFADQIRCDEEPATASVKPVKRKSKKSKSKKLATKNLKKVRP
DRPQADRPQAQAPEYDSAYDYGENYDYGTDPDYDGENGTRTPDAGFRQPDDEIPRVSTTT
TTTRAPEPEPIVQPFTCHHEGKWYREGEAFQSGYKGCATCRCRNGSIQCDEADCPRVIPT
TTTTTTTTTTEKPEFDASAVGNRLPAAPSGEPGVPGEAGQPGIPGTPGIPGPPGPPGPAP
DLTFYTQQMQETMGGADKGPGPENFQFMQAQVGPVGPRGPPGPTGTTGPQGFQGSRGEPG
ETGPPGVGGPPGPRGLPGPPGKDGAAGDDGEVGPQGPVGLSGPRGLPGMPGVPGLKGHQG
LPGPEGMKGESGAVGEKGSVGATGPAGVPGAVGAAGPRGERGREGPPGPAGLRGIDGIAG
PPGPPGPVGKQGPPGFPGSNGAKGDMGGAGPKGSQGPQGPRGESGRPGQPGEPGLNGPPG
KDGVSGEKGSPGSPGIAGPPGFPGPRGAPGANGSPGDAGSKGEPGLPGERGYKGEAGIKG
EGGMPGPRGLPGAVGPEGKRGKRGMKGPTGLPGPQGERGLPGSPGLPGPDGAQGVKGQSG
DRGAMGPQGPKGSSGDPGPPGAPGMQGLRGQPGRPGAQGKAGTPGERGLPGADGKVGEPG
TQGLQGLPGPMGLPGDKGFTGEPGKDGDIGPPGPVGPRGDAGKDGPPGISGPPGPPGNDG
DRGPPGTPGPRGFQGLPGTSGNPGAQGKDGQNGPPGPPGPAGQPGIRGERGFPGERGPVG
TPGTPGLRGEPGAQGNDGPPGSPGPNGMKGHQGAPGMVGLPGLRGPAGPAGDKGERGSSG
PPGPEGPAGRVGERGLQGPLGPPGPPGEPAEKGEPGTPGIPGEPGAPGAVGERGAVGPQG
LQGFPGPQGPSGTPGAKGDRGNMGLKGEQGNSGLPGVPGEPGPQGLIGLTGSKGARGEPG
LRGETGPMGTPGRPGDQGPIGQTGNPGAPGTAGMPGLKGNPGDTGRPGNAGPPGMPGQQG
AEGIKGEAGSDGPPGAPGNQGPQGVPGDRGLPGLPGPSGAQGLRGMRGAAGEPGISGKPG
NDGPPGAPGLLGPPGPPGPTGDTGPEGLPGKQGPPGIAGRTGDKGPIGNPGTQGTSGAPG
LPGPPGPQGPLGQTGERGLRGENGPQGVDGPPGPRGKPGPPGLEGPKGENGEPGLKGTKG
HRGLIGLQGLPGPAGPSGDKGNAGNEGPTGKPGEAGPRGPPGRDGSPGLQGMLGSAGPRG
PPGNDGKNGQPGQPGPPGPPGPPGDGVGYDAAALAALLGHGQMSNTKGPDPNMGDEPMNL
GRVFELTDEERQKLVENAYEKLKSAFATFKKPDGKQTSPAKTCRDLFAAHPEFTSGHYWI
DPNEGDARDSILVYCDAEKKASCILPQPLRTKELYYDGEEQEVWLGELKEGMKISYKSDS
NQIGFLQLLSASASQNVTYHCRNSVAYYNKDKNSYRQSLKFLAWNDAELTARGPQRLRYE
ALQDDCQHRTAHYSQSVLSYSTDKPMRLPIIDIAIRDVGEAHQQFWIEVGAVCFQ
NT seq
4668 nt
NT seq
+upstream
nt +downstream
nt
atgaagttccgtctcggacgtccgctacttctggcggtgttctttatcatagtgatattc
gcggatcagatacgatgcgacgaagaaccggcaactgcatcggtcaaaccggtgaaaagg
aagtccaaaaagagcaaatcgaaaaagctggctacgaagaacctgaaaaaagtgcgcccg
gatcgtccccaagccgatcggcctcaagcacaagcaccagaatacgattcagcgtacgat
tatggggagaactacgactacggaacggatcccgattatgatggtgagaatggcactcgc
actccagatgctggcttccgtcaaccagatgacgagattcctcgcgtctcgacgaccacc
accaccacgcgggcacccgagccagaaccgattgtacaacccttcacctgccatcacgag
ggcaagtggtaccgggaaggggaagcgttccagtccggctataaaggttgtgccacgtgt
cgctgtagaaatggttcaatacaatgtgacgaggcagactgcccacgggtcatcccgact
acaactaccacaaccactacaacgaccacagagaaaccggagttcgatgcatcggctgtt
ggtaatcgtctgccagcagctccttccggtgaaccgggtgtacctggagaagcgggacaa
ccgggcataccgggtactcctggtattcctggaccgccaggacctccgggtccagcacca
gatctgacattctacacacaacagatgcaagaaaccatgggcggagcagataaaggccct
ggcccagaaaacttccagttcatgcaagcacaggtcggtcccgttggtccacgaggtcca
cccggcccaactggtacaacaggaccgcaaggattccaaggttcgcggggtgaacctggt
gaaacaggaccgcccggtgtcggtggaccacccgggccacgtggattacccggacctccc
ggtaaagatggtgccgcgggtgatgatggcgaagttggaccacaaggtcctgttggattg
tcgggaccgcgaggattgccgggtatgcccggagtcccgggtctgaaaggtcatcagggt
ctacctggacccgaaggtatgaaaggcgaatctggagctgtgggagaaaagggatctgtt
ggagctacaggaccagcaggagttcctggagcagtgggagctgcaggaccgagaggagaa
agaggacgtgaaggtcctccgggaccagctggtttaagaggcattgatggaattgctgga
cctcctggaccaccaggtcccgttgggaaacaaggtccgcctggctttcccggaagcaat
ggagcaaagggagacatgggtggagccggcccgaagggtagccagggtccgcaaggtccc
cggggtgaatccggccgtccaggacaaccgggagaaccaggcctgaatggtccaccgggt
aaagacggagtatctggagaaaaaggaagtcccggttcgcctggaatagcgggtcctcct
ggattccctggtccacgaggcgcaccgggtgccaatggaagtccgggagatgcaggctcg
aaaggtgaaccagggctcccgggtgagcgaggatataaaggagaagcaggtattaaagga
gaaggtggcatgcccggcccgcgtggtctgccgggagcagttggcccggaaggaaagcgg
ggcaaacgaggcatgaagggacctacgggtcttccgggaccacagggagaacgtggttta
ccaggatctcctggactacccggccccgacggagctcagggtgttaagggacagtccgga
gatcgcggtgcgatgggtcctcagggcccgaagggatccagtggtgatccgggaccacca
ggagcaccaggcatgcaaggtttacgaggacaaccggggcgaccgggtgcacagggaaag
gctggtacacctggggaacgcggattgcccggtgcagacggtaaagtaggtgaaccggga
actcaaggtttacaaggattgcccggtccgatgggattacccggtgataagggattcaca
ggtgaacctggaaaagacggagacattggacctcctgggccagttggaccgagaggagac
gccggtaaggatggacccccaggaatatcaggacctccaggtcctcccggaaatgacggt
gatagaggcccgcccggtacacctggtcccagaggattccaaggccttccgggtacatca
ggtaatcctggagcgcaaggaaaagatggacagaatggaccacccggacctcccggtccc
gcgggccaacctggtattcgtggtgagcgaggattccccggagaacgaggaccggtagga
acgccaggaacaccaggtctgcgaggagaaccaggagcgcaaggtaacgatggaccaccg
ggatctccgggaccgaatggtatgaaaggacatcaaggtgctcctggtatggtgggactc
ccaggcttgcgtggcccagcaggcccagcaggagacaaaggagaacgtggaagctctgga
ccacccggaccagagggacctgctggacgtgtcggagaacgaggtcttcagggcccgctg
ggtcctccaggacccccaggagaaccggctgagaagggagaacctggcactccaggaatt
cctggagaacctggagcacctggagcggttggcgaacgaggtgcagttggtccgcaaggt
ctgcaaggattcccggggcctcagggccctagcggaactccgggagcgaagggtgatcgc
ggaaacatgggcctcaagggtgaacaaggtaactctggtctgccaggtgtgcccggtgaa
cctggaccacaaggattgatcggcttgactggctctaagggagcacgcggggaaccggga
ttgcgcggagaaacgggaccaatgggaacaccaggacgtccaggagatcaaggaccgatt
ggtcaaacgggcaatccaggtgcaccaggaacagcgggaatgcctggtctgaaaggaaat
ccgggagatactggtcgacctggaaacgcagggccacctggcatgcctggacagcaaggc
gcagaaggaattaaaggcgaagcgggcagcgatggacctccgggagcgccaggaaatcag
ggtccacaaggtgtaccaggcgatcgaggattaccaggacttcctggtccgagtggggct
caaggtttaagaggaatgcgtggagctgccggtgagccaggcatctccggtaaaccaggc
aacgatggtccgccaggtgctcctggactactcggacctccgggtcctccgggaccaaca
ggtgacactggaccagaaggtttgcccggaaagcaaggaccgcctggaatcgctggacga
acgggtgataaaggaccgatcggaaatccgggaacgcagggcacctctggtgcaccagga
ctgcctggaccaccaggaccgcaaggtcctctcggacaaaccggtgaacgaggactgcga
ggagaaaacgggccacaaggtgtggatggtccgccgggaccacgaggcaaaccgggtccg
cccggattggaaggacccaagggcgagaacggagaaccaggtctcaaaggtaccaaggga
catcgaggattgattggtctgcaaggattgcctggtccagccggcccgtcaggagataag
ggtaacgcaggcaatgaaggacctaccggtaaacccggagaggccggacctcgtggaccg
cctggacgtgatggatcgccgggactgcagggaatgctcggttcggctggtccccgtggt
ccacctggaaatgatggtaaaaatggacagcctggacagcctggaccgccgggccctcct
ggacctccgggtgatggagtcggatatgatgcggccgctctggctgctctgcttggccat
ggtcagatgagcaacaccaagggtccagatccgaacatgggcgatgaaccgatgaatctt
ggccgagtgttcgaactaaccgacgaggaacgccaaaagcttgttgagaatgcgtacgaa
aaactgaagtctgcctttgctaccttcaagaaaccggatggtaagcagacttccccagca
aagacctgccgggatctgttcgctgcacaccctgagtttacttctggacattactggatt
gatccgaatgaaggtgacgctcgggactcgattctagtatactgtgatgccgaaaagaag
gcttcttgcatactcccacagcccctccgtaccaaagaactttattacgacggtgaagag
caggaggtttggctgggcgaactgaaggaaggcatgaagataagctacaagtcggacagt
aatcagatcgggttccttcagctactctcagcaagcgcgtcccagaacgttacctatcac
tgccgaaacagtgtggcttactacaacaaggacaagaacagctacaggcagagtctgaaa
ttccttgcctggaacgatgcggaactaacggcccggggtccccagcgactgcggtacgaa
gctctgcaagatgactgtcagcatcgaacggcacactacagccagtctgtgttgagctac
agtaccgacaaaccgatgcgcttgccgattatcgacattgcgatccgtgacgttggtgag
gcacatcaacagttctggatcgaggttggagccgtgtgcttccagtga
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integrated database retrieval system
