Anopheles marshallii: 128710955
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Entry
128710955 CDS
T10928
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
amrs Anopheles marshallii
Pathway
amrs04382
Cornified envelope formation
amrs04512
ECM-receptor interaction
amrs04518
Integrin signaling
amrs04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
amrs00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128710955
04518 Integrin signaling
128710955
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128710955
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
128710955
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amrs04147
]
128710955
00536 Glycosaminoglycan binding proteins [BR:
amrs00536
]
128710955
Exosome [BR:
amrs04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
128710955
Glycosaminoglycan binding proteins [BR:
amrs00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
128710955
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
128710955
NCBI-ProteinID:
XP_053661793
LinkDB
All DBs
Position
3
Genome browser
AA seq
1817 aa
AA seq
DB search
MLRAADPTLPGGLESKDTVHRRRRRCVRSVTFCVTLFLACLLQLAQPSTAVVCNQTVCDC
KGLKGAPGQIGPHGVPGQSGDPGDIGFDGPPGLRGDRGNRGEVGTSGPKGYRGDTGERGP
LGVPGYAGLPGEPGFRGPYGIDGCNGTDGAMGPPGFPGIPGERGPQGPPGMIGYRGDSGE
GGINSKGTKGDIGVAGFRGVEGQQGYPGNRGSDGVDGMTGAPGDDGLPGLTGERGEQSED
FCPGEPGEPGEPYYYWGGKNETVSIGMKGPKGDRGYDGMPGMHGMKGDSGMQGERGQKGF
KGEEGKIGDRGKQGKEGPPGASGEKGEKGAPGYAGLDGSSGDKGPSGDDGRPGLPGVQGP
PGAKGEYRPELAPIVIGPQGPQGDIGPPGRPGNVGIPGNKGLRGPMGPPGPPGDSGLNGR
AGPKGISPPGQRGDDGEGGPPGPIGSRGTPGQAGPKGQLGFPGRSLLGPKGEPGTNGLNG
DFGEKGDQGDDGVSGDKGLPGIGVNITGPPGPAGLPGRDGPPGDLGFNGYTGQKGDKGFR
GEDCGTCPPGPKGVKGEDGDIGRSGLDGYDGNRGLPGPRGYQGTPGKQGLKGLSGRKGER
GDFGERGVPGEPGRPGVLRRAKDFIDLTPELGDRGDRGQRGDQGMPGDLGAFGAVGYPGR
PGEPGEYGDDGESGRPGNDGQPGIDGRNGAPGRDAFVNEYNIWSIRGTPGVPGDKGVKGE
LGDQGDRGEPGAMSELIYNIEGPKGVKGEMGDYGPDGEKGYKGEMGLHGLRGLDGPPGLP
GLSIQGPEGYKGYYGVIGDHGPVGTPGEDGRPGPDGIPGLQGLRGQRGDPGRPILMGEKG
VEGEGGFYGEIGDKGFRGPEGVRGTMGESGTKGERGEPGPLGKPGLRGNKGQMGDIIYGD
RGMPGLPGRNGLQAPFGDKGERGEPGMEGFPGPKGERGEIGRDGLPGLPGDDGLPGERGL
QGRMGDMGEEGYQGERGFTGDLGHPGLSGARGLAGVRGPKGLSGDPGDMGFPGRNGAPGR
KGERGDFGDMGPRGRKGGASFSGMKGEMGEPGMMGPPGYNARPGMMGQKGEEGDAGQVID
GYQGVKGQKGAPGFPGIPGRPGAKGERGDVGVFGPKGISGDKGRDGYAGIAGRAGRPGPR
GLVGPRGEQGTRGEAGESGEDGLTGFVGTKGMRGDVGMVGPTGQPGVDGDPGLPGIPGNV
MMRSAQQGDQGDSAPEGLEGDQGPPGLKGQRGYPGRKGEQGLPGFVGMRGIEGYDGPKGQ
RGDPGMKGLPGDIQTRTERGDQGEAGYDGLTGRPGITGNKGAPGDYGDNGLMGLQGLPGF
VNGALKGMKGQLGFEGAPGQAGLAGLPGLDGLMGPPGPRGLAGSIGPIMPGFRGDTGDDG
LPGLEGMPGPPGFPGDRGLQGLPGLSGLPGPKGQQGEEGPEGYHGLVGLAGMKGEVGDLP
PLSNWRPTQPGDRGTPGMRGEPGDEGDNGPPGYPGMRGPKGLQGLQGEQGATGEVGAKGE
RGIPGPPGRSGIEGLPGLPGLPGDSAGPPPPPKNLGFIFARHSQKVTIPECPINTYKLWD
GYSLVNVIASSRSTGQDLGTAGSCLRRFSTMPFMFCDINNVCNYASNNDDTIWLATPEPM
PMSMAPIPADQVERYISRCSVCESNTRVMALHSQSMSIPDCPEGWEELWLGYSYAMHTSD
NSGGFGQDFVSPGSCMEEFRPQPVIECHGHGTCNFYDGISSFWLTIIDDSMQFNTPQQMT
LKAHQTSKVSRCIVCRRKAGIMRALHGGSSITASALRRPQTATVSRPQYPLPPAQAAAGP
RRRVSPGRQRNRNRSQG
NT seq
5454 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgggccgcggaccccacgctcccggggggtctggaatctaaggacaccgtccac
cggaggcgccgacgttgcgtacgctcggtgacgttttgcgtgacacttttcctggcgtgt
ttgctccagcttgcacaaccatcaacggccgtggtctgcaaccagacagtatgtgactgc
aaagggctgaagggtgctccgggacagattggaccacacggcgtaccaggccagagcggc
gatccaggcgatatcgggttcgatggcccacccggactgcgcggtgatcggggaaatcgg
ggcgaagttggtacgagcggtccgaaaggttaccggggtgatacaggagagcgaggaccg
ctgggtgtgcccggatacgcaggactgcccggtgagcccggtttccgtggcccgtacggg
atcgatggttgcaacggaacagacggtgcgatgggacctcccggcttccccggtattcca
ggcgaacgtggtccacagggtccgcccggtatgatcggttaccggggtgattctggtgag
ggtggcataaactccaagggcaccaagggtgacataggagtggccggttttcgcggcgtc
gaaggacagcagggctacccgggtaatcgaggttccgatggagtcgatggcatgaccggt
gcaccgggcgacgatggattgccggggctgacaggcgaacggggtgagcagagcgaagat
ttctgtcccggagaaccgggcgaaccgggcgagccttactattactggggcggcaagaac
gaaacggtcagcatcggcatgaagggtccgaagggtgaccgtggatacgacggaatgccg
ggcatgcatgggatgaagggcgattcgggcatgcagggcgaacgaggacagaagggtttc
aagggcgaggaaggcaagatcggtgaccgcggcaagcagggtaaggagggcccaccgggt
gcctcgggcgaaaagggagagaaaggtgcacccggatatgcggggctggatggaagctcg
ggcgacaagggaccgtcgggagacgacggccgaccgggattgccgggagtgcagggaccg
ccgggagctaaaggtgaataccgacccgagctggcgccgatcgtaataggaccgcaagga
ccacagggagacataggaccgcccggtcgaccgggcaacgtcggtattcccggaaacaag
ggtctccgtggaccgatgggtccacccggtccgcccggtgattctggtctgaatgggcgt
gccggtccgaaaggcatctcaccgcccggacagcgcggtgacgatggtgagggaggaccg
ccgggaccgataggtagccgcggtactccgggacaggcgggaccgaagggtcagctcggt
tttcccggccgaagcctgctcgggcccaaaggtgaaccaggcacgaacggattgaacgga
gactttggcgagaaaggtgatcagggcgatgatggcgtatccggcgacaagggtttgccc
ggcattggggtgaacatcaccggaccaccgggaccggccggtttacccggtcgagatgga
ccgccaggcgatttgggcttcaatggttacactggccagaaaggtgacaaaggattccgt
ggagaagactgcggcacttgcccgccgggaccgaaaggtgttaagggcgaagatggcgat
attggacgctccggactggacggatacgatggtaatcgtgggctgcccggaccgcgaggc
taccagggcacaccgggaaagcaagggctgaagggtttgtcgggccgaaaaggcgagcgg
ggtgactttggagaacgtggtgttccgggtgagccgggacgaccgggagttcttcggcgt
gcgaaagactttatcgacctgacgccagaattgggcgatcgaggagatagaggacaacgc
ggtgatcagggcatgcctggggatttgggtgcctttggcgctgtcggataccctggacga
cccggtgaaccgggagagtacggtgacgacggtgaatctggacgaccaggaaacgatggg
caaccgggaattgacggtcggaacggagcgccgggtcgggatgcttttgtcaacgagtac
aacatctggtccattcgcggaacgcccggtgtaccgggtgacaaaggtgtcaaaggagag
cttggtgaccagggtgatcgcggtgagccgggcgcaatgtcagagctgatctacaacatc
gagggtcccaagggcgtgaagggagaaatgggagactacggacctgatggcgaaaagggt
tacaagggtgagatgggtctgcatggactgcgcggattggatggaccacccggtttgcct
ggtctcagcattcagggaccagaggggtacaagggttactacggcgtgatcggtgaccat
ggaccggtcggtactcccggtgaggatggacgccccggaccggatggcattcccggactg
cagggattgcgtggacagcgcggtgacccgggacgaccgatactgatgggagagaagggc
gtggaaggcgagggcggcttctacggcgagatcggagacaagggcttcaggggaccggag
ggtgtgcgcggcacgatgggtgaatcgggcacgaagggcgagcgaggcgaaccgggaccg
ttgggtaagccgggtctgcggggaaacaagggccagatgggagacatcatctacggtgac
cgtggaatgccgggattgcccggacgcaacggtctgcaggccccgttcggcgacaaaggc
gaacgtggcgagccgggcatggaagggttccccggaccgaagggcgagcgaggcgaaatc
ggacgcgacggattgcccggactgcccggagacgatggactgccgggcgagcgaggtctg
cagggacgcatgggcgacatgggtgaggaaggttaccagggagaacgtggctttacgggc
gacctgggccatcccggtctgagcggagcccgtggactggcgggagtgcggggacccaaa
ggcctatcgggtgatcccggagatatgggattccccggacggaatggagcgcccggacgg
aagggagagcggggcgatttcggtgacatgggaccacgtggccggaagggcggtgcgtcg
ttcagcggtatgaagggagagatgggagagccgggcatgatgggcccgcccggatacaac
gcgcgacccggaatgatgggacaaaagggcgaggaaggagacgccggccaggtcatcgat
ggatatcagggagtgaagggacagaagggtgcccccggtttcccgggcatcccaggccgt
ccaggagcgaagggcgagcggggcgacgttggagtgttcggaccgaagggaatctccggc
gataagggacgcgatggatacgctggtattgccggtcgtgcgggacgtccgggtccacgc
ggactggtcggtccgcgaggtgagcaaggcactcgcggagaggcgggagaatcgggtgaa
gatggcctaactgggttcgtaggtacgaagggtatgcggggtgatgtgggtatggttgga
cctacggggcaacccggcgttgatggcgatccaggtttacccggcattcctggcaatgtt
atgatgcgatcggcgcaacaaggtgaccaaggtgactccgccccggagggcctagaaggc
gatcaaggacctcccggactaaagggacaacgaggctatccgggccggaaaggggaacag
ggactgcctggattcgtgggcatgcgcggcatcgaaggatacgacggaccgaaaggacag
cgtggagatcctggtatgaagggactgcccggcgacatccagacccgaaccgaacgcggc
gaccagggcgaggctggatacgatggactcaccggacgaccgggcattaccggcaacaaa
ggagcaccaggcgactacggtgacaatggactgatgggtctacagggtcttccgggcttc
gtgaacggcgcgttgaagggaatgaagggtcagctcggtttcgaaggtgccccgggccag
gctgggctggctgggctgcccggtttggatgggttgatgggtccacccggaccacgagga
ttggctggaagcatcggtccaatcatgcccggcttccggggtgacactggcgacgatggt
ctgccgggcctggaaggcatgcccggtccaccaggattcccgggcgaccgaggattgcag
ggattgcccggtctgagtgggctccccggacccaagggtcagcagggagaggaaggcccc
gaaggctaccacggtctggtgggattggccggcatgaagggagaggtgggtgatctaccg
ccgctctcgaactggcgaccaacgcaacctggcgatcgcggaactcccggtatgcgcggt
gaacccggcgatgaaggcgacaatggaccgccgggctatccgggcatgcgcggtccgaag
ggtttgcagggcttgcaaggcgaacagggcgcaacgggcgaagtcggcgccaagggtgag
cgaggcattcccggaccaccgggacgcagcggtatcgaaggactgccaggcctgcccgga
ttgccgggtgactcggccgggccaccgccaccgccaaagaacttgggtttcatattcgca
cgccactcgcagaaggtgaccatccccgagtgtcccatcaacacgtacaaactgtgggat
ggctactcgctggtgaatgtcatcgctagcagtcgctccaccggacaggaccttggcacc
gccgggtcgtgtctgcgccggttcagcacaatgccgttcatgttctgtgatattaacaac
gtgtgtaactacgcctcgaacaacgacgacacgatatggttggccacacccgagccgatg
ccaatgtcgatggcaccgataccggcggatcaggtcgagcgctacatttcccgctgcagc
gtgtgtgagtccaacacgcgtgtgatggcgctgcacagtcaatcgatgagcattccggac
tgtcccgaaggttgggaggagttgtggcttggctacagttatgcgatgcacacatcggac
aactcgggaggattcggacaggactttgtgtcgcccggatcctgcatggaagagttccga
ccacagcccgtcatcgaatgccatggacacggtacgtgcaacttctacgacggtatttcc
tccttctggttgacgatcatcgacgactccatgcagttcaacacgccccagcagatgaca
ctaaaggcacatcaaaccagcaaagtcagtcgatgcatcgtttgccgtcgaaaggccggc
atcatgcgcgctctgcacggaggcagttcgataactgcatcggccctgcgcagaccgcaa
acggccacagtgtcacgcccgcaatatccgctgcctccagctcaggcagcggcgggcccg
aggagacgagtgtcaccgggacggcagcgtaaccgcaaccgcagccagggctag
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integrated database retrieval system
