Anopheles marshallii: 128711032
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Entry
128711032 CDS
T10928
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
amrs Anopheles marshallii
Pathway
amrs03020
RNA polymerase
amrs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
amrs00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
128711032
09124 Replication and repair
03420 Nucleotide excision repair
128711032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amrs03021
]
128711032
03400 DNA repair and recombination proteins [BR:
amrs03400
]
128711032
Enzymes [BR:
amrs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
128711032
Transcription machinery [BR:
amrs03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
128711032
DNA repair and recombination proteins [BR:
amrs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
128711032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
128711032
NCBI-ProteinID:
XP_053661875
LinkDB
All DBs
Position
3:complement(22016918..22022820)
Genome browser
AA seq
1884 aa
AA seq
DB search
MSGDSKAPLRTVKRVQFGILSPDEIRRMSVTEGGIQYAETMEGGRPKLCGLMDPRQGVIE
RTSRCQTCAGNMTECPGHFGHIDLAKPVFHIGFITKTIKILRCVCFYCSKMLVSPQNPKI
KEIVLKSKGQPRKRLAYVYDLCKGKKICEGGEDMDMTKEPLPEGTKKQGHGGCGHYQPSI
RRTGLDLMAEWKEVNDENQEKKIQVSAERVYEILKHITDDECFVLGMDPKFARPDWMIIT
VLPVPPLAVRPAVVMFGATKNQDDLTHKLSDIIKANNELKKNESTGAAAHVIAENIKMLQ
FHVATLVDNDMPGMPKAMQKSGKPLKAIKARLKGKEGRIRGNLMGKRVDFSARTVITPDP
NLRIDQVGVPRSVAQNMTFPELVTPFNIDRMQELVRRGNSQYPGAKYIVRDNGERIDLRF
HPKSSDLHLQCGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCTSP
YNADFDGDEMNLHVPQSMETRAEIENIHITPRQIITPQANKPVMGIVQDTLTAVRKMTKR
DVFIEKEQMMNLLMFLPTWDGKMPQPCILKPKPLWTGKQIFTLIIPGNVNMIRTHSTHPD
EEDDGPYKWISPGDTKVMVEHGDLIMGILCKKTLGTSAGSLLHIVFLELGHEIAGRFYGN
IQTVVNNWLLLEGHSIGIGDTIADPQTYAEIQRAIKKAKEDVIGVIQKAHNMELEPTPGN
TLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIACVGQQ
NVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFYFHAMGGREGLIDTA
VKTAETGYIQRRLIKAMESVMVNYDGTVRNSVGQLIQLRYGEDGLCGETVEFQNLPTIKL
SNKVFEKRYRFDPTNERTLRRIFNEDVIKELTESSSVIQEIEAEYEQLLRDREALRQIFP
NGDSKVVLPCNLQRMIWNVQKIFHINKRLPTDLSPLKVIQGVRDLLQRCVIVAGTDRLSK
QANENATLLFQCLVRSTLCTKYVAEEFRLNNEAFEWLIGEIETRFQQAQVNPGEMVGALA
AQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKRPKAPSLTVFLTGGAARDA
EKAKNVLCRLEHTTLRKVTANTAIYYDPDPQRTVIAEDQEFVNVYYEMPDFDPTRISPWL
LRIELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNADKLVLRIRIMNEDNKFQES
EEENMDKMEDDMFLRCIEANMLSDMTLQGIEAIGKVYMHLPQTDAKKRIVITPEGEFKPI
GEWLLETDGTSMMKVLSERDVDPVRTYSNDICEIFSVLGIEAVRKSVEKEMNNVLQFYGL
YVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLNDAAAHAEVDPM
RGVSENIILGQLPRMGTGCFDLLLDAEKCKLGMEIPHTSILGGTGMFFGSAATPSMTPWQ
QSATPGYGGWSPSGPASGMTPGGPSFSPSAQSDASGMSPSSWSPIRGSPSSPGPSMSPYP
PSSPSMSPSYSPSSPNYAQNSPGGASPSYSPTSPHYSPPSPQYSPGSSNYSPSSPNIHSA
TQNYSPTSPGYSPMSPMHQTSTSNFPSPGYSPTSPNYSPTSPSYSPSSPVFSPTSPSYSP
SSPSYSPTSPSYSPTSPSYSPTTPKFTPVTPSYSPSSPNFSPTSPRYSPTSPRYSPTSPS
YSPSSPNYSPTSPSYSPTSPSYIGSPHYTPASPQYGQTSPNYSPTSPSYSPSSPQHSPGS
SSNHYSIGSSSYSQTPAPYSPNMSSYSPSSPRYSPTSPVYTSSSPTYSPSSPAYSPTPQG
YSPSSPASPTYSPTSPSYDDSNED
NT seq
5655 nt
NT seq
+upstream
nt +downstream
nt
atgagtggagattcgaaggcgccattgcgcacggtgaagcgcgtacagttcggcatcctg
tcgcccgatgaaatccgtcggatgtcggtaacggaaggcggtatacagtacgcggaaacg
atggaaggtggtcggccgaaactgtgcggtctaatggacccacggcagggtgtgattgag
cgtacgtcacgctgtcagacgtgtgcaggcaacatgaccgaatgcccgggacatttcgga
cacatcgatcttgccaaaccggtgtttcacattgggttcatcacgaagacgattaaaatt
ttgcgttgtgtatgcttctactgctccaaaatgctcgtttcgccgcagaatcctaagatc
aaagagattgtcctgaagtcgaaaggccaacctcgcaagcgccttgcatatgtgtatgat
ctgtgcaagggaaagaaaatttgcgaaggtggtgaagatatggacatgaccaaggaaccc
ttacccgaaggcaccaaaaagcagggccacggaggttgtggtcactatcagccatccatt
cggcgtaccggactggacttaatggccgagtggaaagaagttaacgatgagaaccaggag
aaaaagatccaggtgtcggcagaacgggtgtacgaaattttgaagcacatcaccgacgac
gaatgcttcgtgctcggtatggatccaaagttcgctcgtcccgattggatgataatcacg
gtactgccggttccaccgttggccgtacgaccggctgtcgttatgttcggtgccacgaag
aatcaggacgatttaacacacaagctgtccgacatcatcaaagcaaacaacgagctgaag
aaaaacgaatcaaccggtgcggcagcacacgtcattgcggaaaatatcaaaatgctacag
ttccacgtagcaacgctggttgacaacgatatgcccggcatgccaaaagcgatgcaaaag
agtggcaaaccgctgaaagcgatcaaagcacgtctgaagggtaaggaaggccgtattcgt
ggtaacttgatgggaaagcgtgtggatttttcggcccgtactgtcattacgcccgatccg
aatctgcgtatcgatcaggtcggtgtgccccgatccgttgcgcaaaacatgaccttcccg
gagctggtgacaccgttcaacatcgatcggatgcaggagctggtgcgccgtggtaactca
cagtacccgggcgccaagtacattgtgcgcgacaatggcgaacgtatcgatttacgtttt
cacccgaaatcatctgatctgcatttgcagtgcggttacaaagtagagcgtcatttgcgc
gatgacgatctggtcattttcaaccgtcagcctacgctgcacaaaatgagtatgatgggg
catcgtgtgaaggtgctgccgtggtccaccttccggatgaatcttagctgtacctcaccg
tacaatgccgatttcgatggtgatgagatgaatctgcacgtgccgcagtcaatggaaacg
cgtgcagagatcgagaatattcacattactccacgacagatcattacgccgcaggccaac
aaacccgtcatgggtattgtgcaggatacgttgacggcggtccgtaaaatgaccaagcgt
gatgtgttcatcgaaaaggagcagatgatgaatttgctcatgttcttaccaacgtgggac
ggcaaaatgccacagccttgcattctgaagccgaaaccattgtggacgggtaaacagatc
tttacactgatcattccgggcaacgtgaacatgattcgtacgcattccacacacccggac
gaggaggacgatggtccgtacaagtggatttcgccgggtgacacgaaagtcatggtcgaa
catggtgatctgataatgggcattctctgcaagaagacactcggtacatcggcgggatcg
ctgctgcatattgtgtttctcgagctgggacacgaaatagctggtcggttttatggcaac
attcaaacggtcgttaacaactggttgctgctggagggtcacagcattggtattggtgac
acgattgctgatccgcagacctacgccgaaattcagcgcgctatcaagaaagccaaggag
gacgtgataggcgtgatccagaaggcgcacaacatggaattggaaccgacgccgggtaat
acgttgcgtcagacgttcgaaaatcaggtgaaccgtattctgaacgatgctcgtgacaaa
actggtggctcggccaagaagtcccttacggagtacaacaatctgaaagctatggtcgtt
tccggttccaagggttccaacattaacatttctcaggttattgcttgtgtcggacagcag
aacgttgaaggtaagcgtattccattcggtttccgcaaacgcacacttccccacttcatc
aaagacgattacggtcccgaatcacgaggtttcgtggaaaattcgtaccttgctggtttg
acacccaccgagttctacttccacgctatgggtggtcgtgaaggtctgatcgatactgct
gtcaaaacggccgaaaccggttacatccagcgtcgtttgataaaggctatggagtcagtg
atggtaaattacgacggaactgtgcgtaattcggttggacagcttatccagttgcgttac
ggagaggatggactgtgcggcgagacggtcgagttccagaatttacccaccatcaagctc
tcgaacaaagtgtttgagaaacggtatcgattcgacccgaccaatgaacgtacgttgagg
cgaatctttaatgaggatgtcatcaaggagctcaccgaatcttcctccgtcatccaggag
atcgaagccgaatatgagcagttgctgcgcgatcgagaggcactacggcaaatcttcccg
aacggcgattcgaaagttgtgttgccctgcaacttgcaacgcatgatatggaatgtgcag
aaaattttccacatcaacaaacgtttgccaacggatctgtccccgctgaaggtaattcag
ggcgtgcgtgatctgctgcagcgctgtgtgattgtggccggtacggatcgtttatcgaaa
caggcaaacgaaaacgccaccttgctgttccaatgtctcgtccgctcgacgctctgcaca
aagtacgtggctgaagagttccgactgaacaacgaagcgttcgagtggttgattggtgaa
attgagacacgcttccaacaggcacaggtcaacccgggtgagatggtgggtgccttagct
gcccaatcgctcggtgaaccggccacacagatgacgctcaacacgttccactttgccggt
gtgtcgtccaaaaacgtaacgctcggtgtgccgcgtctgaaggaaattatcaacatttcc
aagcgtcccaaggcaccttcacttaccgtctttctcacgggcggtgctgctcgcgatgca
gaaaaggccaagaacgtgctttgccgactggaacatacgacattgcgcaaggtaacggcc
aacacggcaatctactacgatcccgacccacaaaggacggttattgcggaagatcaggaa
ttcgtgaacgtgtactacgagatgccggacttcgacccgacgcgcatctcaccctggctg
ttgcgtattgagcttgaccgtaagcgcatgacggataaaaaactcactatggagcaaatt
gccgaaaagattaatgccggctttggggatgatttgaactgtattttcaacgatgacaac
gcggacaagctcgtgctgcgcatccgtatcatgaacgaggacaacaagttccaggaaagt
gaggaagaaaatatggacaaaatggaggacgacatgttcctgcggtgtatcgaggcgaac
atgctttcggacatgacgctacagggtatcgaagcgatcggtaaggtatacatgcatctg
ccacaaacggatgcaaagaagcgcatcgtcattacaccggaaggtgagtttaaaccgata
ggcgaatggttgctggaaacggacggtacctctatgatgaaggtgttgagcgagcgggac
gtcgacccggtgcgcacgtacagtaacgacatctgtgagatcttctccgtgttgggcatt
gaggcggtacgaaagtcggtcgaaaaggaaatgaacaacgtgctgcagttctacggactg
tacgtgaactatcgccatctggcgctgttgtgtgacgttatgacagcgaagggtcatctg
atggccatcactcgtcacggtattaaccgacaagatacgggcgcattgatgagatgttca
ttcgaggaaacggtggacgtgttgaatgatgcggcggcccacgcagaggtagacccgatg
cgcggtgtgtcggagaacatcattcttggtcagttaccccgaatgggcacgggttgtttc
gatttgttgcttgacgcggaaaagtgtaagcttggtatggaaattccgcacacatcgatc
ctgggtggaacgggcatgttcttcggttcggcagcgacaccgagcatgacgccttggcaa
cagtccgccactccgggctacggaggatggtctccatcggggccggctagtggcatgact
cccggtggtccaagcttctcgccatcggcacaatcggacgcttccggaatgtcaccatcg
tcgtggtcaccaatccgtggatcaccgagctcacctggtccatcgatgtcgccgtatcca
ccatcgtctccgtcaatgtctccgtcatactcaccaagcagtccgaactacgcacaaaac
tcacccggtggagcttcaccgtcatactcgccgaccagccctcattattcgccaccgagc
ccacagtattcgccgggaagctcaaactactcgccgagcagtccaaatatccattctgcc
acgcaaaactattcaccgacatcgccagggtattctccaatgtctccgatgcatcagacg
agcacgtccaactttcccagcccgggttattctccgacgagtcccaactactcgccaacc
tcccccagctattcaccatcatcgcccgtcttttcgccaaccagcccatcatattcgccg
tcgagtccttcgtactctccaacaagtccctcgtattcaccgacgagcccgtcctattct
ccaacaacgcccaaattcacacccgtcactccatcctattccccatccagcccgaatttt
tcgcccacttctccgcgctattcgcccacttctccgcgctattcgcccacttcccccagc
tattctccttcatcgccgaactattcgcccacatcgccaagctattcgccgacctctcct
tcgtacatcggaagtccacactacactccggccagcccacagtacggtcaaaccagtccg
aactattcgcctacgtcgcccagctattcgccgtcatcgccgcaacattcaccgggcagc
agcagcaatcactacagcatcggatcgtcgtcgtactcgcaaacgccggcaccgtattcg
cccaacatgtcttcgtactcacccagcagtccgaggtattcgccaacaagtccggtctac
acttccagctcaccaacttattcaccctcatcaccggcctactcaccaacgccacaagga
tatagcccttcgagtccagccagtcctacctattcaccgaccagtccctcatacgatgat
agtaacgaggattaa
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integrated database retrieval system
