Anopheles marshallii: 128713954
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Entry
128713954 CDS
T10928
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG5
KO
K11125
protein SMG5
Organism
amrs Anopheles marshallii
Pathway
amrs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
amrs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128713954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amrs03019
]
128713954
03032 DNA replication proteins [BR:
amrs03032
]
128713954
Messenger RNA biogenesis [BR:
amrs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
128713954
mRNA cycle factors
Common to processing body (P body) and stress granule
128713954
DNA replication proteins [BR:
amrs03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
128713954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
128713954
NCBI-ProteinID:
XP_053664804
LinkDB
All DBs
Position
3:complement(17332688..17337455)
Genome browser
AA seq
1144 aa
AA seq
DB search
MEYSSNDVKQLFRSVYTLVKGQDEQKATLTVDDILQPSFQLSHRVLVSQCIQLIFEDFEC
VGQKSREILWRKGYYDVVSVLKRQKGRANGSALLHAADRLISEGINYFKAIVLRFQQIFN
LDSLRYLVDFALLEDYDMDMLREEPSCYSLLQLHTQDDAAAKELYTKQEISFALETIHAL
LISLGDLHRYQLEFGIGNRMQLRERTRKYYLEAFKLNPKMGMPQNQLGMLVGGQNGHLDA
VYHYLYSLCCTIPFECSETNVNVIFQKNIRHLESGGELADGVVDGNDILVDEFIATFLLV
VDVFFYDKVVTDFNALCHSVLIEFKKILSIRQLLEEYYLTDDMLFKIVSILFFCMHRIKM
INSDKIYSLNAFLVALCSELLQWCTSSFEKFTSEHSREDAQFQELYLRRYQRYSAQVNRA
RDKIRNGSAMYSKDQKSSSGVEEGTGSQDSRGNKENEVANHGGKVSSTSIIASGSKKGTD
NGRGKGTNSRQKKHSRRRRRAYSNESDSEDGERYEDEDEDVSEDDYYDRSGTESNHSSSE
EEEEDEDDAMSLSSYGSYDEYSDEGDYDQEEDGDHSEEEEDHPGDHNEDEQHGVIACEEL
TPEQLKFKKRYQKLDPNIVLEFAQGERTMRSLKVLFDWLLCNMDVLHNCYQSNPEFLHNI
MKLLNFFNLDFFTNRFYFTRDLITVQGLRLDLQEIFNCRRTIPLQEDIAMKRFPLFEPTQ
EGLLWETPYKLGIGQEDESFLRLMKMVDFGFAVCKSKKFDYCFQPKVRAFKVRVGYNGSG
GSTKGRNKSSSKGQRNGGKQRRKGDTAMGKNGGNKRDWNAVCGGDTGNRSRGLSYSQSRT
GRTVRGTGLGEEKNQRKPIDNSDHRREDATNDVLLSRERNKRQRNRVRNKTRHGNDEYGL
AEGHEQTPTLFTKKGYLHNRANGMLIQRGAGCNPGVPDGDEMQREKKAGPQEKGDISAIM
GQLWLRNEVETLESKVNKRAGNLTLTPYLVLDSKCLTEYTSIVKNLIRTKKFVVLIPGAV
LGDLDELKKHSEGARNAIKWLEVEFSKGNRFLRAQKNHESLPMPLVKIPKKLDREGAVFN
QIVQFCNHIVTDHADNDNDIITYLSGDNLQDKKLCNGSSYIGILEAIPVKFEQIVTFYSS
YKRK
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atggaatattctagcaacgacgtaaagcaactgttcaggtctgtctacaccttagtgaag
ggacaggacgaacagaaagcgacactcacggtagacgatatcctgcagccaagtttccag
cttagccaccgcgtactggtctcgcagtgtattcaactgatttttgaagattttgaatgt
gtcggtcagaagtcacgggaaatcctatggcgcaagggatactacgatgtggtctccgtg
ctcaagcgtcaaaagggccgtgcaaatggatcggctttgctgcacgccgccgaccggttg
attagtgagggcatcaactacttcaaggccatcgtgcttcgctttcaacaaatcttcaat
ctggattcgttgcgctaccttgtcgattttgccctgctagaggactacgatatggatatg
ctgcgtgaggaaccttcgtgctactcgctgttacagctgcatactcaagatgacgctgcc
gcaaaagagctttacaccaagcaggaaatttcattcgcactggaaacgatccacgcactg
ttaatatcgctgggagacttacatcgctatcagctcgagtttggtatcgggaatcggatg
cagttgcgcgaacgtacacgcaagtactatctggaagcgttcaagcttaatccgaagatg
ggcatgccacagaaccagctcggtatgttggtaggtggacagaacggacatcttgacgcg
gtgtatcactatctatactcgctctgctgtacgattccgttcgagtgcagcgagacgaat
gtaaatgtaatctttcagaagaacattcgccacctggagagtggtggtgagttggcggat
ggtgtcgtggacgggaatgatatacttgtggacgaattcatcgctacatttctgcttgtg
gtggatgtgttcttttacgacaaggtcgtcaccgattttaatgccctgtgccattcggtg
ctaattgagtttaagaagatactcagcattcggcagttactggaagagtactatctgacg
gatgatatgctgttcaaaatcgtttcgatactgttcttttgcatgcaccgcatcaagatg
atcaactcggacaaaatctacagcttgaacgcgtttctggtggcgctctgttcggagttg
ctccagtggtgcacgtccagctttgaaaaattcacgagcgaacatagccgcgaggacgct
cagtttcaagagctctaccttcgacggtaccaacgctacagtgcacaggttaatcgtgcg
cgggacaaaattaggaatggatcggcgatgtattctaaggatcagaaatcttcatccggc
gtggaggagggaacgggcagtcaggatagtcgcggtaataaggagaacgaggttgcgaat
catggtgggaaggtatcttctacatcgatcattgccagcggatcgaaaaaaggtactgac
aatggacgtggtaaaggcacgaatagtcgccagaagaagcattcccgtcgtcgtagacgt
gcgtattcgaatgaaagcgattcagaggatggagagcgctatgaagacgaggacgaggat
gtatcggaggacgattactacgatagatcgggcacggagtcaaaccacagcagcagcgaa
gaagaggaggaagatgaagacgatgcaatgtcactatcgagctatggatcgtacgacgaa
tattcggatgaaggagactatgatcaggaggaagatggagatcattccgaagaggaagag
gatcaccccggggaccataatgaagatgaacagcatggcgtcatcgcttgcgaggagtta
actccggaacagttgaagttcaaaaaacgctaccaaaagctagaccctaacattgtgcta
gagttcgcccagggcgagcgtacgatgcgttcgctgaaggtcctgttcgattggttactg
tgcaacatggatgtgctgcacaattgctaccaatcaaacccggagtttctgcacaatatc
atgaagttgctgaatttcttcaatttggacttctttacgaatcgattctatttcacgcgg
gatctgatcaccgttcagggtttgcgcctggatctgcaagagatttttaactgtcgtcgt
accattccgctgcaggaggacattgcgatgaagcgttttccgttgtttgaaccaacccag
gagggtttgctgtgggaaacaccgtacaagctgggcattggccaggaagatgaaagtttc
ctgcgcctgatgaagatggttgacttcgggtttgctgtgtgcaagtcgaagaagtttgac
tactgcttccagccgaaggtgcgtgcattcaaagttcgagttggctacaatggaagcggc
ggcagcaccaagggtcgcaacaagtcatcgtccaagggccaacgcaacggtgggaaacaa
cgacgtaagggcgatacggcgatgggcaaaaatggcggaaacaagcgggattggaatgcg
gtgtgcggtggcgacactggaaatagatcccgtggtctatcgtatagccagtcacgtact
ggtcgcactgtgagaggtactggattgggggaggagaaaaatcaacgtaaaccgatcgac
aatagtgatcatcgacgtgaggatgcgacgaatgatgttctgctttcacgggagcgtaat
aagcgtcagcgtaacagagtgcgcaacaagacccggcatggaaacgacgagtatggtttg
gcagaaggtcacgaacaaactccaacgttgttcacaaaaaagggctatctgcacaatcgt
gctaatggaatgttgatacaacgtggcgctggatgcaaccccggagtccctgatggagat
gagatgcaacgggagaaaaaagcaggacctcaggagaaaggtgacatcagtgctattatg
ggtcaactatggttacggaatgaggtcgaaacgcttgaatccaaggttaataaacgagct
ggtaacttaacgctgacaccgtatctggtgctggattctaaatgtctgaccgaatacact
tctatagtgaagaatttgatcagaacaaagaagtttgtcgttttgatcccgggcgctgtt
ttgggtgacctggatgagttgaagaagcatagcgaaggtgcacgtaatgccatcaagtgg
ttggaggttgagtttagcaaaggcaatcgtttcctgcgtgcgcagaagaaccacgaatca
ttgccaatgccattggtgaaaattccgaaaaagttagatcgcgaaggtgcagtattcaat
cagatcgttcagttctgcaaccatattgtgactgaccacgccgataatgataacgatatc
atcacctacctgtcgggagacaatctgcaggacaagaaactctgcaacggtagcagctac
atcggcatcctggaggcgataccggtcaagtttgagcaaattgtcacgttctactctagc
tacaagcggaaatga
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