Anopheles marshallii: 128714366
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Entry
128714366 CDS
T10928
Name
(RefSeq) protein PAT1 homolog 1-like
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
amrs Anopheles marshallii
Pathway
amrs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amrs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128714366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amrs03019
]
128714366
Messenger RNA biogenesis [BR:
amrs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128714366
mRNA degradation factors
5'-3' decay
Decapping complex
128714366
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
128714366
NCBI-ProteinID:
XP_053665215
LinkDB
All DBs
Position
3
Genome browser
AA seq
937 aa
AA seq
DB search
MDSFFGFNTNLSVENDEDDDELGRICPQARTAGLRSPLQRRCKEDISDEEEYDALNDETF
GSADKGDWEDIHENLVRLERGRNGIGAISFPGDDDDGDGSSGDVLFEDYDLDLQLSKLTC
YDTNDESGRSSAVAQSIGDEFASKLRLDPSIWGSPLKAQPAAQQQYTGHKSHVAPFASLQ
SYVGFKPPQLPTYPIGEQKTSRPPPALYPPMKMLSVEDIERSIIQNQHQQNQQSFHLFQK
QIAQPQQPLQSFRPSSTLPVKSREHFTAAKDVKTMPPMPLINTSIAPPLGVTPSMMTPPP
HLLAARNCALFPPGPPPPAAAPLLNHPNRLPLGILPYNMLAARPYSTPINNLAMHPAFPP
RCPYGSPLQGFLGPPLIQRHPGPPGPFLLQRSPTPLQNNQFNQRLVQEIQQNHPMLAFNR
QLANSFNNGMMKNVSQNHPRPAPVKQMHYQQQQRSWLSNGIPEDAGVPPREHDEYANMMS
TRDKQWLIGIQLTQLNSDLPYLNDYYFTVYKQRLAAAKGENENRIYKENQLSHPFTQPKE
HAQLLLLSMLTKNVKGGLLNLGRERRSSESKPASGIDGKDGTVGGRAYTPFQFEKSLGKL
QCGSVTAPRKLIDADVMGSDQLNGNGVTAAEQSLTQRKARHVLLLIETLYNLVLKLEDKL
NPTAIAAAALLREKKLREQDMLCDAAGTNDGSRGQLHTSGGTDTKCDGMLAELEVSFEDL
STSLIGQLTQDKITSILGVRKGRILLRRSLAVLHGHAARWTLWGMIFTALPCLAKRDRDD
AEGLLLTLFSEFERQIRYGTITDLLQVAKTIGSSCKVMQCIVSSKFLLSCIITIIFQMEM
FCGKNPATLLSASQDDWWISFLADVNSVVRDTSRPAHSSVAINPDNNIVRTLRVHFARFG
TRVDGTDLLNFITDNGNSKQRSGAARKQSLQESNVTK
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggattcgttttttggatttaatactaatctttcggtggagaacgacgaggacgatgat
gagcttggcagaatatgtcctcaggcacgcacagccggcctgcgttcgccactgcaacgg
cgatgtaaagaagacatttcggacgaggaagaatatgacgctctgaatgatgaaacgttc
ggttcggcggacaaaggagactgggaagacattcacgaaaacctggtacggctggaacgt
ggtaggaatggcataggagcgatttcctttcccggggatgacgatgacggtgatggtagc
agtggcgatgtgttgttcgaggattacgatctggatttgcagctttcgaagttgacgtgc
tacgataccaacgatgagagcgggcggagcagtgcggttgcacagagcattggcgatgag
tttgcgagcaagttacggttggatccgagcatatggggtagtccattaaaggcacaacct
gcagcacagcaacagtacaccggtcacaaatcgcacgtagctccattcgcctcgcttcag
tcgtatgtcggatttaaacctccacaacttccaacgtatccgataggcgaacagaaaact
tcacggcctcctcctgcgttatatccaccaatgaaaatgctctcagtggaggatattgag
cgaagcattatacagaatcagcaccaacaaaaccaacaatcgtttcatttatttcagaaa
caaattgcacaaccacagcaacctttgcaatcgtttcgtccatcatcaacactgccggtg
aaatctcgcgaacattttacggcggctaaggatgtcaagacgatgccacccatgccgcta
attaatacatcgatagctccaccgttgggagttacgccctcgatgatgacaccaccaccg
cacctgttggcagcgagaaactgtgccctgtttccgccggggccgccaccaccagcagca
gctcccttgttgaaccatccgaatcgtcttccgcttggcatattgccgtacaatatgtta
gctgcacgaccgtactcgacaccaatcaacaatctagcgatgcatcctgcttttcctccg
cgctgtccatacggttcgccgctgcaaggatttttaggtccaccactgatacaacgccat
ccaggacctccggggccatttctgctgcaacgcagtccaactccactgcagaacaatcag
tttaaccagcgtctagtgcaggaaatacagcaaaaccatccgatgctagcatttaaccga
cagctcgccaactctttcaacaatggaatgatgaagaacgtatcgcaaaaccatcccagg
ccagcgcccgttaagcagatgcattatcaacagcagcaacgatcgtggttatccaacggc
ataccggaagatgctggggtaccaccgagagaacacgatgaatacgcaaacatgatgagc
acgcgggacaagcagtggttgatcgggatacagctgacgcagctcaactctgatttaccg
tatctgaacgattattactttaccgtttacaagcaaagattggcagcggcgaagggtgaa
aatgaaaatcgtatctacaaggaaaaccaactgagccatccgtttacccagccgaaggaa
catgcccagctgctactgctttcaatgctaacgaagaacgtcaagggtggattgttgaat
ttgggtcgagaacgtagaagttccgaatccaaaccggccagcggtatcgatggaaaagat
ggcacggtaggtggtcgtgcatatacgccattccagtttgaaaagtcgctcggaaagttg
cagtgcggaagtgtcacggcaccgaggaagcttatcgatgccgatgttatgggaagtgat
cagctgaacgggaatggcgtaacagcggcggaacaatcgttgacgcagcgcaaggctcga
catgtgctgttgctcattgaaacattgtacaaccttgtgcttaagctggaagataagctt
aacccgaccgccatagccgctgccgctttgttgcgtgaaaagaagttacgcgaacaggac
atgctttgtgacgctgcaggtaccaacgatggttcccgcggtcagctacacacgtcgggc
ggaacggatacgaagtgcgatggaatgctagcagagttggaagtatcattcgaagatcta
tccacttccctgataggtcagctaacgcaggacaaaattacatccatactcggtgtacgc
aagggtcgcatattactccggcgttcgttggctgttcttcatggccatgctgctcgctgg
acgttgtggggtatgatttttaccgcgctgccctgcctggccaaacgggatcgtgacgac
gcggagggtctgctgttgacactgttcagtgagtttgagcgccagattcggtatggcacg
ataacggatttgctgcaggtggcgaaaacgatcggttcttcgtgcaaggtgatgcaatgc
atcgtcagcagtaaatttctgctctcctgcatcatcaccataatctttcagatggaaatg
ttttgcggcaaaaatccggccacactcttaagcgcatcgcaggacgactggtggatatca
ttcctggcggacgtgaacagcgtagtaagggatactagccgaccagcgcacagcagcgtt
gcgataaatcctgataacaatatcgttcgcacgctacgggttcactttgcacgcttcggc
acacgtgtggacgggacggatctgctaaacttcattaccgataatgggaatagcaagcag
agatcgggtgcggccagaaaacaatcattacaagaatcaaacgtcaccaaatga
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