Anopheles marshallii: 128719911
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Entry
128719911 CDS
T10928
Name
(RefSeq) PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X1
KO
K12571
PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:
3.1.13.4
]
Organism
amrs Anopheles marshallii
Pathway
amrs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amrs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128719911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amrs03019
]
128719911
Enzymes [BR:
amrs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
128719911
Messenger RNA biogenesis [BR:
amrs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128719911
mRNA degradation factors
3'-5' decay
Pan complex
128719911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH_1
PAN2_N
RNase_T
UCH
zf-CCCH_2
DUF7563
DNA_pol_A_exo1
Fungal_KA1
Motif
Other DBs
NCBI-GeneID:
128719911
NCBI-ProteinID:
XP_053669525
LinkDB
All DBs
Position
2:complement(63610725..63615821)
Genome browser
AA seq
1327 aa
AA seq
DB search
MDYVYMSGGDPGNPRAEDIITLTMYDNDPNGVVQEFPDAAEYGAFNIGSSEAEFIEHGMI
LADGGDRYGVSTVCFDTQEELIWMGNQGGHVTSYFGSAMQKYTSFQVHANEVVRQIATID
SGILALTPTTLRHQIRRGLPKFTFRSERMVDMVCMIEHAPARLLMGGHQSDLIELDIATV
AELTSVVAGVNGCAILRRHSRYLCAGDAYGKITLLDPNSLAIEHELSTHSGSLSDFDVQG
NYLISCGLSGRQGNLTIDRFLMVYDMRMLRLVSPIQVLVEPQLLRFLPSHYSRLAVVSPQ
GQLQLVDTVELSEPRVCMFQINTSGSQCLSFDISGTSQAMAFGDQSGHINLISAAKINTP
TLQFNPYSRDTEFADTIEPATPFVPITDTNFPLSSVLLPHLTTGDRWLSDWPPWMNTYEH
WRAKAIEPVVIGTMKMQGPIGYAPNPRTGLRNQIPYLLDGSNGTLATGSATSASHGSAAT
KGGTGSEQQGIKLVPRRYRKVEVKYSKLGTQDFDFEHYNQTGFVGLEANLPNAYCNAMLQ
VLYFIIPLHKAILAHCCTKEFCLSCELGFLFHMLNVGSSSSPCQASNFLRSFRTVPEAAA
LGLILSSNSANVNLISLIQNWNRFVLHQIHSELLEAMKKNETMHFYEHGQHSQHHSLEQD
SVQRFQILNLGNGTSTATSQPQTTAGNPVPEESEIGRLFGTQQQTTHRCNKCNTTRVKDN
VLLVCSLLYPTATTNNVEGTFGTILKHSLGVEKTTPAWCETCNKFTPTNQKSRVTDLPAI
LSINCGLDNEKELEYLKRQMTRSTGAQASPSQSGQGTTTAAGATGDQSTVTFNGSGTGTK
MCRYGTNCSRVDCHFAHPRKSSPCVISAATSSSTSAAATHGMQKSWFPLSFQMSLDEQQN
LDISSLRTASNGEPVILNATAEHDAELQNSRALDAEGKEQNTANADSSDDLVRVETITKT
YNLSAVVCYINDGSQRNLVSLIHVPACYQELKQPGDSNPMGGWYIFNDFSISPVPVQEAV
WFTLDWKVPCVLFYTSSGLAEEQCRQELGFNSEQLTQYVNPFTTDLYEEETTDDGSGLAP
EDGATDTMGKDEGDDKHPDRDTESAILFKSLGRNECFQAGDLVAMDAEFVTLNPEESEIR
SDGKMSTVKPSHMSVARITCIRGQGDYEGVPFMDDYISTQEQVVDYLTKFSGIKPGDLDA
NFSNKRLTTLKNSYQKLRFLVDSGVKFVGHGLRNDFRVINIIVPPAQVVDTVHLFHLPHH
RMVSLRFLAWQFLGIKIQSETHDSIEDARTALHLYKHYLRLLEKDEFTHALSTLYETGKK
LQWKVPD
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atggactacgtctacatgtccggtggtgatcccggtaatccgcgcgctgaagacatcatt
acgctgacaatgtacgataacgatccgaatggtgtggtccaggagtttccggatgcggca
gaatacggtgcattcaacatcggttcctccgaggcagagttcatcgagcacggtatgatc
ttggcggatggaggtgatcgatacggtgtgtccaccgtatgtttcgatacgcaggaggaa
ctgatctggatgggcaaccaaggtggtcacgtaacgtcctacttcggcagcgcgatgcaa
aagtacacctcgttccaggtacatgcaaacgaagtcgtacggcagatagcgacaatcgat
tcgggtattctagcactcacaccgaccaccttaagacatcagattcgacgaggtttgccg
aaatttacatttagatcggaacggatggtagatatggtatgtatgatcgagcacgcaccc
gcccgcctgctgatgggaggccatcagagcgatctgatcgaactggacatcgctacggta
gccgaactgaccagtgttgttgcaggtgtgaatggatgtgctatcttgcggcgtcattcc
cggtacctttgtgccggtgatgcttacgggaagataacgctgctcgatccaaacagcctc
gcgatcgagcacgagctctcaacacactccggcagtttgtcagatttcgacgtgcaagga
aactaccttatatcgtgtgggttgagcggtcgccagggtaaccttacgatagatcgcttc
ctgatggtgtacgatatgcgcatgctgcgattagtttcacccattcaggtgttggtagaa
ccacagctactgcgcttcctgccttcacactactctcgattagccgtggtatcgccgcag
ggacaactccagctcgtggacacggtggaactgagcgagccacgcgtttgtatgttccag
atcaataccagcggttcacaatgtctctccttcgacattagcggaaccagccaggcgatg
gcatttggtgatcaatccggtcacataaaccttatttcggcagcaaaaataaacacacca
acgttgcagtttaatccgtactcacgcgacaccgagtttgcagatacgattgaaccggcg
acaccatttgtaccgattacggacacaaacttcccactgtcatcggtgctgctgccacat
ctgacaactggagaccgttggctaagcgattggccaccatggatgaatacgtacgaacat
tggcgagcgaaggcgatcgaaccggtggtaatcggtacgatgaaaatgcagggcccgatc
ggctacgcaccaaatccgaggacgggcttgcgcaatcaaattccctatctgctggacggt
tcgaatggcactttggccaccggttcggcgacatccgcatcccacggttccgctgccact
aaaggtggtactggttcggaacaacagggcataaagctggtcccgcgccgatatcgtaaa
gtggaggtaaaatatagtaaactcggcactcaggattttgactttgagcattacaaccag
acgggatttgtagggctcgaagcaaaccttccgaatgcgtactgtaacgcgatgctgcag
gtgctatactttatcattccgctgcacaaagccatcctggcacactgttgcacgaaggaa
ttttgcctatcgtgtgaacttggcttcctgttccatatgctcaacgtgggaagctccagt
tcgccatgccaggcgagcaattttctgcgctcctttcgcaccgtaccggaagcagctgcc
ctcgggctgatcctttcgtccaacagtgcgaatgtgaatttgatcagtttgatacagaac
tggaatcggttcgtgctgcaccagatccactccgagctgctcgaggcgatgaagaagaat
gaaacgatgcacttttacgagcacggtcaacattcacaacatcactcgttggagcaggat
agtgtgcaacggtttcaaattctcaacttaggcaacgggacatcaacggcaacgagtcaa
ccgcaaacaacagcgggaaacccagtaccggaggaatcggaaattggacgtttatttggc
acgcagcaacaaacgactcaccgatgtaacaaatgcaatacaacgcgcgtgaaggacaat
gtgctgctcgtttgcagtttactctacccaaccgcaactaccaacaacgtcgaaggaaca
tttggaaccattttaaaacactcccttggggtggaaaaaacaacacccgcctggtgcgaa
acgtgcaacaagtttactccgacgaatcaaaaatcacgcgtaaccgatctacccgcaata
ctttctatcaattgcggtctggacaacgagaaagagctggaatatctgaagcgtcaaatg
acccgatcaacaggtgcacaagcttcacccagccagtcagggcaaggtacaacgaccgcg
gccggtgcaaccggcgatcaatcaacagtgacgtttaatgggtccggcacgggcacaaaa
atgtgccgatacggaacgaactgttcacgggtcgattgtcatttcgctcatccaaggaaa
tcttctccttgtgtcatatcggccgctacatcctcttctacatcggctgctgcgacacac
ggtatgcaaaagtcttggttcccgctcagcttccaaatgtcactcgacgaacagcagaac
cttgacattagttcgttacggaccgcttcgaatggtgagccggtaatactaaatgctact
gcagagcacgatgcggagctgcagaactcgagagcattggatgcggaaggaaaggaacaa
aacaccgcaaatgcagattcttcggacgatcttgttcgggtagaaacaatcaccaaaacc
tacaacctgtccgcagtggtttgctatatcaatgatggttcccagcgtaaccttgtgtct
ctgatacacgtgccggcctgctatcaggagttaaagcaaccgggagattccaacccaatg
ggaggatggtacattttcaatgattttagcatttctcctgtgccggtacaggaagctgta
tggtttacactcgactggaaagtaccgtgcgttctgttttacaccagcagcggtctggcc
gaagaacagtgtcgccaagaattgggttttaacagcgagcagctaacgcagtacgtaaat
cctttcacgactgatctgtatgaagaggaaactacggatgatggtagtggactagcgccg
gaagatggtgctaccgatacgatgggtaaagatgaaggggatgacaaacacccggatagg
gacacggaatccgccattctgtttaaatcgctagggcgcaatgaatgtttccaggccggc
gatctggtcgcaatggatgcggaattcgtaacactcaacccggaggagagcgaaatccga
tccgatgggaaaatgtctaccgtgaaaccgagccacatgagcgttgcgagaataacgtgc
attcggggtcagggcgattacgaaggtgtaccttttatggacgattacatctcgacgcag
gaacaggtcgtggactatctgacaaagttttccggcatcaagccaggcgatttagatgcc
aactttagcaacaaacggttaaccacgttgaagaattcgtaccaaaagctgcgctttctc
gtggacagtggtgtaaagtttgtcgggcacggtttacggaatgactttcgcgttatcaac
atcatcgtgccgccggcacaggtcgttgatacggtgcatctgttccatctgcctcatcat
cgtatggtatcgttgcgctttctggcctggcagtttctcggcattaagatacagtcggaa
acgcacgattccatcgaagacgcgcggacagcgctacacctgtacaaacactatctgcgg
ctgttggaaaaggatgaatttacgcacgccctttcgacgctgtacgaaacaggcaagaaa
ctgcagtggaaggtgcctgactaa
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