Actinoplanes missouriensis: AMIS_11430
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Entry
AMIS_11430 CDS
T01795
Name
(GenBank) hypothetical protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
ams
Actinoplanes missouriensis
Pathway
ams03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ams00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AMIS_11430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ams03019
]
AMIS_11430
03009 Ribosome biogenesis [BR:
ams03009
]
AMIS_11430
Enzymes [BR:
ams01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
AMIS_11430
Messenger RNA biogenesis [BR:
ams03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AMIS_11430
Ribosome biogenesis [BR:
ams03009
]
Prokaryotic type
rRNA processing factors
AMIS_11430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
DnaJ_CXXCXGXG
DUF5351
Motif
Other DBs
NCBI-ProteinID:
BAL86363
UniProt:
I0H026
LinkDB
All DBs
Position
1225700..1228618
Genome browser
AA seq
972 aa
AA seq
DB search
MVEPVAAEADLEEIDEELIADAAIEAASAARAAGVPVVGILPLDDDFVEEQPAGPSPARR
AALPPAVLFMPPDPSEAQAAPAATRRRRGAAEPIAAEPVAEEQPQPTTTTRRRRGAAAQA
AAEPVTAEPVEAPAAAAEPVEETVTEVPVEGTRRSRRRRRGAAEETAEAEVAVEEPVLEE
TDETSDDAEDGDEDGDDEESGRRRRRRGRRGRGRGKGPSDESEDGESDTEDEDGDDESAE
ASAEEGDEETDGDGVTRRRRRRRRKGSSGDAEVGGIEDGVHTVVRVREPRRTSDEVQGVS
GSTRLEAKRQRRRDGREQRRTRPPILSESEFLARREAVDRVMVVRQKQDRTQIAVLEDGI
LVEHYVARATSGTMVGNVYLGKVQNVLPSMEAAFVDVGRGRNAVLYAGEVNWDATGLEGR
ARSIEQALRSGDSVLVQVTKDPIGHKGARLTSHIALSGRHLVYVPNGNASGISRKLPDTE
RKRLRDILKKLVPDGAGVIVRTAAEGASEDELARDVKRLQAQWEDIQARAAEGNAPRALS
EEPDLVIRVVRDLFNEDFRELVVQGEQAYAEVEGYLESVSPDLVERLRRHTGVADAFAEW
RIDEQIMKALDRKVFLPSGGHLVIDRTEAMTVVDVNTGKYTGAGGNLEETVTRNNLEAAE
EIVRQLRLRDLGGIVVIDFIDMVLESNRELVLRRLTECLGRDRTKHQVTEITSLGLVQMT
RKRIGAGLLEAFSETCDHCKGRGVIIHPEPVPEKRSNGGGGAATQVKAVAAAPAQQAPAQ
QTSSGKRRRRGGDSAAPAEVTPAEVEITTPAEPAKPATIAEAATIDVEPAGDGPVAQVAE
APPAAAAPVTPPPVATPPVAQPPAAAPTASAPAAPVAGSGIISRPVKQALTNSDGSEYDI
SGYDLSRYDVAETNDTAEANGIDHAEDEPMRLAGSDDPDAAEDDDEDDDAVGAGASGRRR
SRRSGTRRRTRP
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgagccggtcgccgccgaggccgacctggaggagatcgacgaggagctgatcgcg
gacgccgcgatcgaggccgcctcggccgcccgcgccgcgggtgtgccggtcgtcggcatc
cttccgctcgatgacgacttcgtcgaggagcagccggccggcccgtcgccggcccgccgt
gccgccctgccgccggccgtgctcttcatgccgccggacccgtccgaggcgcaggccgcc
ccggccgccacccgccgccgccgtggcgctgccgagccgatcgccgccgagccggtggcc
gaggagcagccgcagcccaccacgaccacccgtcgccgtcgtggcgccgccgcgcaggcc
gccgccgagccggtcacggccgagccggtcgaggcgcccgccgccgcagccgagccggtc
gaggagaccgtcaccgaggtgcccgtcgagggcacccgccgttcccgccgccgccgtcgt
ggcgccgcggaggagaccgccgaggccgaggtcgcggtcgaggagccggttctcgaggag
accgacgagacgtccgacgacgccgaggacggtgacgaggacggcgacgacgaggagtcg
ggccgccgccggcgccgccgtggccgccgtggccgtggccgtggcaagggcccgtccgac
gagtccgaggacggcgagtccgacaccgaggacgaggacggcgacgacgagagcgccgag
gcctcggccgaggagggcgacgaggagaccgacggtgacggcgtcacccgtcgccgccgt
cgccgccgccgcaagggctccagcggtgacgccgaggtcggcggcatcgaggacggcgtg
cacaccgtggtccgggtccgcgagccccgccgcacctcggacgaggtgcagggcgtctcc
ggttcgacccggctggaggccaagcgccagcgccgccgagacggccgtgagcagcgtcgc
acccgcccgccgattctgagcgagtcggagttcctggcccgccgcgaggcggtcgaccgg
gtcatggtggtgcggcagaagcaggaccgtacccagatcgcggtcctcgaggacggcatc
ctggtcgagcactatgtcgccagggcgacctccggcaccatggtcggcaacgtgtacctg
ggcaaggtgcagaacgtgctgccgagcatggaggccgcgttcgtcgacgtcggccgcggc
cgcaacgccgtgctctacgccggcgaggtgaactgggacgccaccggcctggaggggcgc
gcccgctcgatcgagcaggcgctgcgctccggcgactcggtgctggtgcaggtcaccaag
gacccgatcggtcacaagggcgcccggctgaccagccacatcgcgctctccggccggcac
ctggtctacgtgccgaacggcaacgcgtccgggatcagccgcaagctgccggacaccgag
cgcaagcggctccgcgacatcctcaagaagctggtgccggacggcgcgggcgtgatcgtc
cggaccgcggccgagggcgccagcgaggacgagctggcccgcgacgtgaagcggctgcag
gcgcagtgggaggacattcaggcccgggccgccgaggggaacgcgccgcgcgcgctctcc
gaggagccggacctggtcatccgcgtggtccgcgacctgttcaacgaggacttccgcgag
ctggtcgtgcagggcgagcaggcgtacgccgaggtcgagggttacctcgagtcggtctcc
ccggacctggtggagcgtctgcgccggcacaccggtgtggccgacgccttcgccgagtgg
cggatcgacgagcagatcatgaaggcgctggaccgcaaggtcttcctgccctccggcggt
cacctggtgatcgaccggaccgaggcgatgaccgtcgtcgacgtcaacaccggtaagtac
accggcgcgggcggcaacctcgaggagacggtcacccgcaacaacctggaggcggccgag
gagatcgtgcgtcagctgcggctgcgcgacctcggtggcatcgtggtgatcgacttcatc
gacatggtgctggagagcaaccgcgagctggtgctgcggcggctcaccgagtgcctgggc
cgggaccggaccaagcaccaggtaaccgagatcacctcgctcggcctggtgcagatgacc
cggaagcggatcggcgcgggtctgctcgaggcgttcagcgagacctgtgaccactgcaag
ggccgtggggtgatcattcaccccgagccggtgccggagaagcgctcgaacggtggcggc
ggcgccgccacccaggtgaaggcggtggcggcggcgcccgctcagcaggcgcctgctcag
cagacgtcgagcggcaagcgccggcggcggggtggcgacagcgccgctccggccgaggtg
accccggccgaggtcgagatcaccacgcctgccgagcccgccaagcccgccacgattgcc
gaggccgccacgatcgacgtcgagccggccggtgacggtccggtcgcgcaggtcgccgag
gcgcccccggcagcagccgcaccggtgaccccaccgcctgtcgccacaccgcctgtcgcc
caaccgccggcagccgctccgacggcgtccgcaccggccgccccggtggccggctcggga
atcatcagccgtccggtgaagcaggcgctgacgaactccgacggcagcgagtacgacatc
agcggttacgacctgtcccggtacgacgtggctgagacgaacgacacggctgaggccaac
ggcatcgatcacgccgaggacgagccgatgagactggccggttcggacgacccggacgcg
gccgaggacgacgacgaggacgacgacgccgtcggtgcgggcgcgagtggccggcgccgc
tcccgtcgcagcggcacgcgcaggcgtacccgtccctga
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