Actinoplanes missouriensis: AMIS_16040
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Entry
AMIS_16040 CDS
T01795
Name
(GenBank) putative excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
ams
Actinoplanes missouriensis
Pathway
ams03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ams00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AMIS_16040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ams03400
]
AMIS_16040
DNA repair and recombination proteins [BR:
ams03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AMIS_16040
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AMIS_16040
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
RsgA_GTPase
AAA_21
AAA_16
nSTAND1
AAA_22
AAA_23
AAA_25
APS_kinase
nSTAND6
NACHT
nSTAND3
Viral_helicase1
NB-ARC
PRK
cobW
DnaJ_CXXCXGXG
MMR_HSR1
NTPase_1
T2SSE
MeaB
ScfRs
ExoX-like_C
Septin
DUF463
Motif
Other DBs
NCBI-ProteinID:
BAL86824
UniProt:
I0H1D7
LinkDB
All DBs
Position
1730197..1733139
Genome browser
AA seq
980 aa
AA seq
DB search
MADRLTIRGAREHNLRDVNLDLPRDAMIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLFARAGTPH
CPVCGERISKQTPQQIVDRVLAMAEGTKFMVLAPVVRGRKGEYVDLFAELQAKGYARARV
DGTVYPLTEPPKLKKQEKHTIEVVVDRLSVKASSKQRLTDSVEAALGLAGGIVLLDFVDL
AEDDPERERRFSEHLACPNDHPLAIEDLEPRVFSFNAPYGACPECTGLGTKKEVDPELII
PDEEATLRGGAIQPWSGGTTQEYFLRLLEALATAENFSVDTPWRALSSRVQKTILYGAED
QVHVRYRNKYGRERSYYTGFEGVIQWIERRHNDTESDWSREKYEGYMRDVPCKVCGGARL
KPEVLAVTVAGKSIAEVCNLSVGECAELLAGLELDDRQKMIAERVLKEINARLRFLVDVG
LDYLSLDRGAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHRLIETLVRL
RNLGNTLIVVEHDEDTIRTADWIVDIGPGAGEHGGEIVHSGTVEGLLANEKSPTGAYLSG
RKSIPVPAGRRPQTPGREVVVHGAREHNLRNLTVPFPLGQFIAVTGVSGSGKSTLVNDIL
HTVMANQINRARQVPGRHTKVTGLENVDKVVGVDQSPIGRTPRSNPATYTGVFDHVRKLF
AETAEAKVRGYGPGRFSFNVKGGRCENCSGDGTIKIEMNFLPDVYVPCEVCKGARYNRET
LEVHYKGKTISEVLEMPIEEAAEFFSALPAIHRHLRTLVDVGLGYVRLGQPATTLSGGEA
QRVKLASELQKRSTGRTVYVLDEPTTGLHFEDIRKLLLVLNGLVDKGNTVITIEHNLDVI
KTADWLIDMGPEGGSKGGVVVATGTPEEVAEVAESHTGQFLRQVLSLSGKAAGSKAATSR
AAKANAVPAAGRKTRAKATV
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
gtggccgaccgactgactattcgtggcgcgcgcgagcacaacctgcgcgacgtcaacctg
gacctgccccgcgacgccatgatcgtcttcaccgggctgtccggctcgggcaagtcgagc
ctcgccttcgacacgatcttcgcggaggggcagcggcgttacgtcgagtccctgtcgtcg
tacgcgaggcagttcctcggccagatggacaagcccgacgtcgatttcatcgagggcctg
tccccggcggtgtcgatcgaccagaaatcgacgaaccgcaacccccgctcgaccgtcggc
acgatcaccgaggtctacgactacctgcgcctgctgttcgcccgggccggcacgccgcac
tgtccggtctgcggtgagcggatcagcaagcagaccccgcagcagatcgtcgaccgggtc
ctcgcgatggcggagggcaccaagttcatggtgctcgccccggtcgtccgcggccgcaag
ggtgaatatgtcgacctcttcgccgagctgcaggccaagggttacgcgcgcgcccgcgtc
gacggcacggtgtatccgctgaccgagccgccgaagctgaagaagcaggagaaacacacc
atcgaggtggtggtcgaccggctcagcgtcaaggcgtcgagcaagcagcggctcaccgac
tcggtggaggcggcgctcggcctggccggcggcatcgtcctgctcgacttcgtcgacctg
gcggaggacgacccggagcgggagcggcgcttctccgagcacctggcctgcccgaacgac
catcctctcgcgatcgaggacctggaaccgcgggtcttctccttcaacgcgccctacggc
gcctgtcccgagtgcaccggcctcgggaccaagaaggaggtcgaccccgagctgatcatc
ccggacgaggaggccaccctccggggcggcgcgatccagccgtggtccggcggcaccacc
caggagtatttcctgcgcctgctggaggccctcgccaccgcggagaacttcagcgtcgac
acaccctggcgggcgctctccagccgggtgcagaaaaccatcctgtacggggcggaggac
caggtccacgtccgttaccggaacaagtacggtcgcgagcgctcctactacaccggtttc
gagggcgtgatccagtggatcgagcggcgccacaacgacaccgagagcgactggtcgcgc
gagaagtacgaggggtacatgcgcgacgtgccctgcaaggtctgcggtggcgcccggctc
aagcccgaggtgctcgcggtgaccgtggccggcaagagcatcgccgaggtctgcaacctc
tcggtcggtgagtgcgccgagctgctggccgggctggagctcgacgaccggcagaagatg
atcgccgagcgggtgctcaaggagatcaacgcccggctgcggttcctggtcgacgtcggc
ctggactacctctcgctggaccgcggcgccggcacgctctccggcggcgaggcgcagcgt
atccggctcgccacccagatcggctccggcctggtcggcgtgctctacgtgctggacgaa
ccgtcgatcggcctgcaccagcgggacaaccaccggctgatcgagacgctggtccggctg
cgcaacctgggcaacacgctgatcgtggtggagcacgacgaggacaccatccggaccgcc
gactggatcgtcgacatcggtccgggcgccggcgagcacggcggcgagatcgtgcacagc
ggcacggtcgagggcctgctggcgaacgagaaatcgcccaccggggcctacctgtcgggc
cgcaagagcatcccggtcccggccggccgccgcccgcagacgcccggtcgtgaggtggtc
gtgcacggcgcccgcgagcacaacctgcgcaacctgacggtcccgttcccgctcggccag
ttcatcgcggtcaccggggtgagcggctcgggcaagtcgacgcttgtcaacgacatcctg
cacaccgtgatggcgaaccagatcaaccgggcgcgccaggtgccgggccggcacaccaag
gtcaccggcctggagaacgtggacaaggtcgtcggcgtcgaccagtcgccgatcggccgg
accccgcgctccaacccggccacctacaccggcgtcttcgaccacgtgcgcaagctcttc
gccgagaccgcggaggcgaaggtccgggggtacggtccgggccgcttctcgttcaacgtg
aagggcggccgctgcgagaactgttccggtgacggcacgatcaagatcgagatgaacttc
ctgccggacgtctacgtcccgtgcgaggtgtgcaagggcgctcggtacaaccgggagacc
ctcgaggtgcactacaaggggaagaccatctccgaggtcctggagatgccgatcgaggag
gccgcggagttcttctcggcgctgccggcgatccaccgccacctgcgcaccctggtcgac
gtcggcctgggttacgtgcggctcggccagcccgccacgacgctctccggcggcgaggcg
cagcgcgtgaaactcgcctccgagctgcagaaacgctccaccgggcggaccgtctatgtg
ctcgacgagccgaccaccggcctgcacttcgaggacatccgcaagctgctgctcgtgctc
aacggcctggtcgacaagggcaacacggtgatcacgatcgagcacaacctggacgtcatc
aagaccgccgactggctgatcgacatgggtccggaaggcggcagcaagggcggcgtcgtg
gtcgcgaccggcacaccggaggaggtcgccgaggtggcggagagtcacaccgggcagttc
ctgcggcaggtcctcagcctctccgggaaagcggccggttccaaggcggccaccagccgg
gcggcgaaggccaacgccgtgccggcggccgggcgtaagacccgcgccaaggcgactgtt
tag
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integrated database retrieval system
