Actinoplanes missouriensis: AMIS_41310
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Entry
AMIS_41310 CDS
T01795
Name
(GenBank) putative RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
ams
Actinoplanes missouriensis
Pathway
ams02020
Two-component system
ams02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ams00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AMIS_41310
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AMIS_41310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ams03021
]
AMIS_41310
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ams02035
]
AMIS_41310
Transcription machinery [BR:
ams03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AMIS_41310
Bacterial motility proteins [BR:
ams02035
]
Flagellar system
Flagellar assembly proteins
Stator
AMIS_41310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
Rv2175c_wHTH
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
BAL89351
UniProt:
I0H8L4
LinkDB
All DBs
Position
4350767..4351630
Genome browser
AA seq
287 aa
AA seq
DB search
MTATVQITVTREQEDLIRDNMALVGHMVREMLFKVPPHVHRDDLASAGYAALVTAAQSFD
AERGIPFGRFAAVRVRGALLDELRSMDWASRSVRARARRADVAREELTRQLGRTPTAEEL
AELLGVAVGELSSVDDDVQRAAVLSLQGFATGTAEDLVTETAMNPEELLLHRERLGYLHD
AVTVLPERLRYVVEASFLQERPLSEVAAELGVTESRVSQLRTEALALLRDGLTTHMEQKR
VPDAKDGCVARRRAAYAAQIAARSTMTTRLGATDAQGLRLSDMPAAA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgaccgttcagataactgtcacccgtgaacaggaagacctgatccgggacaac
atggcactggtcggccacatggttcgcgagatgctcttcaaggtgccgccgcacgtgcac
cgtgacgacctcgcctcggccgggtacgccgcgctggtcaccgccgcgcagtcgttcgac
gccgagcgcggcatcccgttcggccggttcgcggcggtccgcgtccgcggcgccctgctc
gacgagctgcgcagcatggactgggcgagccgctcggtgcgggcccgggcccgccgcgcc
gacgtggcccgcgaggagctgacccgccagctcggccgcaccccgaccgccgaggagctg
gccgaactgctcggcgtcgcggtgggcgagctgagcagcgtcgacgacgacgtgcagcgc
gccgccgtgctgtcgttgcagggtttcgccaccggcaccgccgaggacctcgtcaccgag
accgcgatgaacccggaggagctgctgctgcaccgtgagcgcctcggttacctgcacgac
gcggtcacggtgctgccggagcgtctgcggtacgtggtggaggcgtccttcctgcaggag
cgccccctgtcggaggtggccgccgaactgggcgtgaccgagtcccgggtgtcccagctg
cgcaccgaagcgctcgccctgctgcgcgacggcctcaccacgcacatggagcagaaacgc
gtcccggacgccaaggacggctgcgtggcccgccgccgcgccgcctacgccgcgcagatc
gccgcccgcagcacgatgacgacgcgcctcggcgcgaccgacgcccagggcctgcgtctc
tccgacatgcccgccgccgcctga
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