Actinoplanes missouriensis: AMIS_43980
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Entry
AMIS_43980 CDS
T01795
Name
(GenBank) putative pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ams
Actinoplanes missouriensis
Pathway
ams00040
Pentose and glucuronate interconversions
ams01100
Metabolic pathways
ams02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ams00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
AMIS_43980
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AMIS_43980
Enzymes [BR:
ams01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
AMIS_43980
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
BAL89618
UniProt:
I0H9D1
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All DBs
Position
complement(4620379..4621299)
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AA seq
306 aa
AA seq
DB search
MHTLLAMVLAAALPVPAAAPTADGFATGTTGGVAGPTVTVTNGADLARYAGANTPYTIMV
SGRISVGGMVTVVANKSILGVGASAEISGGGLQLGTTTRPGNNVIVRNIRFSNASDDAIS
VTNKAHHVWIDHNEFLPGYDGSLDIKRQSTNVTVSWNRFLGTDKSMLLGHSDNFTADIGY
LRVTYHHNYFDGSNQRHPRVRFGEPVHVYNNYYRNIGLYGIASTENAGVVAEGNYFENVA
HPCHSTGGYADSAPGRLVQRLNAFVNSGTCEAGGTVAEPSGYYSYTLDPASSVPSLVTAG
AGVGRI
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgcacacacttctcgccatggtcctcgccgcggcgctgccggtcccggcggcagcgccc
acggcggacggtttcgccaccgggaccaccggaggcgtggccggaccgaccgtcaccgtc
acgaacggcgccgacctggctcgctacgccggcgcgaacaccccgtacacgatcatggtt
tccggccggatcagcgtgggcggcatggtcacggtggtcgcgaacaagagcatcctgggg
gtcggtgcttcagcggagatctccggcggcggcctccaattgggtacgaccacgcgaccc
ggcaacaacgtgatcgtccgcaacatccggttcagcaacgcctccgacgacgcgataagc
gtcaccaacaaggcgcaccacgtctggatcgaccacaacgagttcctgcccggatatgac
ggctcgctcgacatcaaacggcagtcgacgaacgtgacggtctcctggaaccgattcctc
ggcaccgacaagtcgatgctgctcggccactccgacaacttcaccgccgacatcggatat
ctgcgcgtcacctatcaccacaactatttcgacggctcgaaccagcgccacccgcgggtc
cgtttcggcgagccggtgcacgtctacaacaactactaccgcaacatcggcctgtacggc
atcgcgtccaccgagaacgccggagtggtcgccgagggcaactacttcgagaacgtggcc
cacccgtgtcactccaccggtgggtacgccgacagcgcgcccggccggctggtgcagcgg
ctcaacgcgttcgtgaactccgggacctgcgaggccggcggcacggtggccgagccgtcc
ggttactactcctacacgctcgatccggcgtcgtcggtgccgtccctggtcaccgcgggc
gccggggtggggaggatctga
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