Actinoplanes missouriensis: AMIS_4630
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Entry
AMIS_4630 CDS
T01795
Name
(GenBank) putative RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
ams
Actinoplanes missouriensis
Brite
KEGG Orthology (KO) [BR:
ams00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ams03021
]
AMIS_4630
Transcription machinery [BR:
ams03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AMIS_4630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_23
HTH_10
MarR
NirdL-like_HTH
DUF134
HTH_3
DUF7343
GerE
HTH_24
HTH_CodY
HTH_37
HTH_Tnp_4
Phage_antitermQ
Motif
Other DBs
NCBI-ProteinID:
BAL85683
UniProt:
I0GY46
LinkDB
All DBs
Position
493008..493895
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AA seq
295 aa
AA seq
DB search
MDALTDTGPKRAGSPGRCQGGPRMTVTETKTKTAVPSSTAASAAAPADSAAELLSALAAM
PAGHPSRASLRDRAIEAWLPLARHLAHRYSGRGEPTDDLIQTATVGLIKAVDKFDPERGV
DFAGYAIPTIIGEIKRHFRDRTWSVRVPRRLQELRLAITEANSTLTHSLGRSPTVPDIAA
HLGITEEEVLEGLEGARAYNATSLSTPISADGNTELGDTLGGEDHEYEIAETRVALGPAL
AMLDEREQKILTLRFYGNLTQSQIADQIGISQMHVSRLLTKALTKLRGQLAADSL
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggacgccctaaccgacacgggccccaagagggccggctctccgggaaggtgtcaggga
ggaccacgaatgaccgtgaccgagacgaagacgaagacggcggtgccgtcgtcgactgcc
gccagcgccgcggctcctgcggacagcgcggccgaactgctcagcgcccttgcggccatg
ccggccggccacccgtcccgcgcatcgctgcgggaccgggcgatcgaggcctggcttccg
ctggcccgtcacctcgcgcaccgctactccggtcgcggtgagcccaccgacgacctgatc
cagactgcgaccgtcggcctgatcaaggccgtggacaagttcgacccggagcgcggggtc
gacttcgcgggctacgcgattccgaccatcatcggtgagatcaagcgtcacttccgggac
cggacctggtccgtacgggtgccgcgccggttgcaggagctgcggctggcgatcaccgag
gcgaacagcacgctgacccactcgctgggccggtccccgacagtgccggacatcgcggcg
cacctcgggatcaccgaggaagaggtcctggagggcctggagggcgcgcgtgcctacaac
gcgacgagcctctccacgccgatctccgcggacggcaacaccgagctgggcgacacgctc
ggcggtgaggaccacgagtacgagatcgccgagactcgcgtcgccctcggtcctgctctc
gccatgctcgacgagcgggagcagaagatcctgacgctgcgcttctacggcaacctgacc
cagtcgcagatcgccgaccagatcggcatctcgcagatgcacgtctcccggttgctgacc
aaggctctgaccaagctgcgcggccagctggccgcggactcactctga
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