Actinoplanes missouriensis: AMIS_5300
Help
Entry
AMIS_5300 CDS
T01795
Name
(GenBank) putative DEAD/DEAH box helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ams
Actinoplanes missouriensis
Pathway
ams03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ams00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AMIS_5300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ams03019
]
AMIS_5300
03400 DNA repair and recombination proteins [BR:
ams03400
]
AMIS_5300
Enzymes [BR:
ams01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AMIS_5300
Messenger RNA biogenesis [BR:
ams03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AMIS_5300
DNA repair and recombination proteins [BR:
ams03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AMIS_5300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_30
Pribosyltran
Motif
Other DBs
NCBI-ProteinID:
BAL85750
UniProt:
I0GYB3
LinkDB
All DBs
Position
578465..580597
Genome browser
AA seq
710 aa
AA seq
DB search
MTDTTQDRAAVRERAEAVLRRLAGEHAVLREDQWRAIEALTVDRRRVLCVQRTGWGKSAV
YFVATALLRADARTGPTVIVSPLLALMRNQVEAAARAGIRARTINSANLDEWSLIEAEVR
AGEVDVLLISPERLNNPDFRDNVLPGLASSTGLLVVDEAHCVSDWGHDFRPDYRRLRTFL
AGLPSHTPVLATTATANARVTADVADQLGEGETLVLRGPLDRDSLRLAVLRLDDPAHRLA
WLADHLDRLPGSGIVYTLTVAAATETAEFLRSRGFAVASYTGQVEDTERRAAEQDLLDNK
IKALVATSALGMGFDKPDLGFVVHLGAPPSPIAYYQQVGRAGRAVEHAEVVLLPGREDAA
IWRYFASLAFPPEDQVRSVLAQLSADRPLSTQALEPLVDLRRTRLELMLKVLDVDGAVRR
TRGGWLATGEPWTYDTVRLRRVAEARATEQQTMIGYADTSDCRMEFLRRCLDDPEAVPCG
RCDNCAGPLFDAEISSASLAAADAFLGRPGVVIAPKKMWPTGLAAVGVSLKGKIPPSEQI
EPGRSVGRLSDLGWGGRLRSVVSPESADASIPDDLAAAVVEVLKSWAHGEDAWQQRPAAV
VAVGSQRRPQLVHSLAEHIARVGRLPLLGALTSDAAGETTARGNSAQRVRALHDAFTVPA
DVSAALAGVTGPILLVDDLVDSGWTMTLAGRALRRAGADAVLPLSLAVAG
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
gtgactgacacgacgcaggaccgagccgccgtccgtgagcgcgccgaagccgtgttgcgc
cgcctggccggagagcacgcggtcctccgggaggaccagtggcgcgccatcgaggcgctc
accgtcgaccgccggcgggtgctctgcgtgcagcgcaccggctggggcaagtcggcggtc
tacttcgtggcgaccgccctgctgcgcgcggacgcccggaccggccccacggtgatcgtc
tcgccgctgctggcgctgatgcgcaaccaggtcgaggccgctgcccgggccggcatccgg
gcgcggaccatcaactcggcgaacctggacgagtggtcgctgatcgaggccgaggtgcgg
gccggcgaggtggacgtgctgctgatcagcccggagcgcctcaacaacccggacttccgg
gacaatgttctccccggcctcgcgtcgagcaccggtctgctcgtggtcgacgaggcgcac
tgcgtctccgactggggacacgatttccgccccgactaccggcggctgcggacgttcctg
gccgggctgccctcgcacaccccggtgctcgccaccacggcgaccgccaacgcgcgggtc
accgcggatgtcgccgaccagctcggcgagggcgagacgctggtgctgcgcggcccgctg
gaccgggactcgctgcgcctcgccgtgctgcgcctggacgacccggcgcaccggctggcc
tggctcgccgatcatctggaccggctgccgggttccgggatcgtctacacgctgacggtc
gcggcggccaccgagaccgccgagttcctccggtcacgcgggttcgcggtggcgtcgtac
accgggcaggtcgaggacaccgagcgccgcgccgccgagcaggacctgctggacaacaag
atcaaggcgctggtcgcgacgtccgcgctggggatgggcttcgacaagccggacctgggt
ttcgtggtgcacctgggcgcgccgccgtcgccgatcgcctactaccagcaggtgggccgg
gccggccgggccgtcgagcacgccgaggtggtgctgctgccggggcgtgaggacgccgcc
atctggcggtacttcgcgtcgctcgccttcccgccggaggaccaggtgcggtcggtgctg
gcgcagctctccgcggaccggccgctctccacgcaggctctggagcccctcgtcgacctg
cgccgcacccgtctggagctgatgctcaaggtcctcgacgtggacggcgcggtccgtcgt
acccgcggtgggtggctcgccaccggcgaaccctggacctatgacaccgtgcgactgcgg
cgggtcgccgaggcgcgggccacagagcaacaaaccatgatcgggtacgcggacacgtcc
gactgccggatggagttcctcaggcgctgtctggacgacccggaagccgtaccgtgcggg
cgctgcgacaactgtgccggccctctcttcgacgccgagatctcgtcggcgtcgctggcc
gcggcggacgcgttcctgggccgccccggcgtggtgatcgcgccgaagaagatgtggccc
accggtctggccgccgtcggtgtcagcctgaaaggcaagatcccgccgtccgagcagatc
gagccgggccggtccgtcggccgtctctccgatcttggctggggcggccggctgcgctcg
gtggtgagcccggagtccgcggacgcctcgatcccggacgatctggccgccgcggtggtc
gaggtgctcaagtcctgggcgcacggcgaggacgcctggcagcagcgcccggcggccgtc
gtggcggtcggctcacagcgtcgtccacaacttgtccacagcctcgccgagcacatcgcg
agggtcgggcggctgccccttctcggtgctctgacctcggacgcggcgggggaaaccacg
gcgcggggcaacagcgcccagagggtacgggcattgcacgacgccttcaccgtcccggct
gacgtgtccgccgccctggccggggtgaccggtccgatcctcctcgtcgacgacctggtc
gactccggctggacgatgacgctggccgggcgggcgttacgccgggccggcgccgacgcc
gtcctcccgctgtccctggccgtcgcgggctga
DBGET
integrated database retrieval system
