Actinoplanes missouriensis: AMIS_55080
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Entry
AMIS_55080 CDS
T01795
Name
(GenBank) putative pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ams
Actinoplanes missouriensis
Pathway
ams00040
Pentose and glucuronate interconversions
ams01100
Metabolic pathways
ams02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ams00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
AMIS_55080
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AMIS_55080
Enzymes [BR:
ams01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
AMIS_55080
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
BAL90728
UniProt:
I0HCJ1
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All DBs
Position
complement(5869510..5870904)
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AA seq
464 aa
AA seq
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MMRSLFSAAAGIVLAATVTTVPFSPAASAALPSGALSSATLSSATPFSVAGTAAALPAAA
RQALPANDGWAAATTGTTGGSAADDAHVFVVRTRAELAAALAGGTDPTPRIVLVAGTINA
NTDDAGNTLTCADYADPAYSLDAYLAAYDPAVWGTATRPSGPLEEARVRSARNQAARIQL
RVGANTTILGLPNARLVGANLLIQNVDNVIVRNLRLEDAADCFPLWDPTDGSAGNWNSNY
DLITLTGATHVWADHNTFSDGNNVDATQPRYFGRPYQVHDGALDVIRASDYVTVSWNVFQ
EHDKTMLIGSTNTVGADAGKLRVTIHHNRFANVGQRVPRVRFGQVDVYNNYYYLTDEDSY
SYSWGAGVYSAIYAENNFLLRSADIDLDEFVYDWGGTAMTEIGTLTRVGTGPVRAVSLLG
EYNATHDPDLGTDAGWTPVLRAGPVTPTALVPAVVTAGAGAGRI
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgctcccttttctctgctgccgccggcatcgtcctcgccgccacggtcaccacc
gtcccgttctccccggcggcgtccgccgctctcccgtccggcgccctgtcctcggcgacc
ctgtcctcggcgaccccgttctccgtcgccggcactgccgcggctcttcccgccgccgcc
cggcaggcgctgcccgcgaacgacggatgggccgccgccaccaccggcaccaccggcggc
tccgcagccgacgacgcgcacgtcttcgtcgtgcgcacccgcgccgaactggccgccgcc
ctcgccggcggcaccgatcccacgccgcggatcgtgctggtcgcgggcaccatcaacgcc
aacaccgacgacgccggcaacacgctgacctgcgccgactacgccgacccggcgtactcg
ctggacgcctacctggcggcctacgacccggccgtgtggggcaccgcgacccgcccgagc
ggacccctcgaggaggcccgggtgcgttcggcgcgcaaccaggccgcgcggatccagctg
cgcgtcggcgcgaacaccaccattctgggcctgccgaacgcccgcctcgtcggcgccaat
ctgctgatccagaacgtcgacaacgtcatcgtgcgcaatctgcgcctggaggacgccgcc
gactgtttcccgctctgggatccgaccgacggatcagccggcaactggaattcgaactac
gacctgatcaccctcaccggcgccacccacgtctgggcggatcacaacacgttcagcgac
gggaacaacgtggacgcgacgcagccacgctatttcgggcggccgtaccaggtgcacgac
ggggcactcgacgtgatccgggcctcggactacgtcacggtctcctggaacgtcttccag
gagcacgacaagacgatgctgatcggctcgaccaacacggtcggcgccgatgcgggcaag
ctccgggtgacgattcatcacaacaggttcgccaatgtcgggcagcgggttccgcgggtg
cggttcggtcaggtggacgtctacaacaactactactacctgaccgacgaggactcctat
tcgtactcctggggtgccggggtctattcggcgatctacgcggagaacaatttcctgctg
cgcagcgccgacatcgacctggacgagttcgtctacgactggggcggcacggcgatgacc
gagatcggcacgctgacccgggtcggcaccgggccggtccgcgcggtcagcctgctcggt
gagtacaacgcgacccacgacccggacctcggcacggacgccggctggaccccggtcctg
cgcgccggtccggtcaccccgaccgcgctggtgcccgccgtggtgaccgcgggagccggc
gccggccggatctga
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