Actinoplanes missouriensis: AMIS_68330
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Entry
AMIS_68330 CDS
T01795
Name
(GenBank) putative ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ams
Actinoplanes missouriensis
Brite
KEGG Orthology (KO) [BR:
ams00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ams03016
]
AMIS_68330
Enzymes [BR:
ams01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AMIS_68330
Transfer RNA biogenesis [BR:
ams03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AMIS_68330
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
BAL92053
UniProt:
I0HGB6
LinkDB
All DBs
Position
7402318..7403481
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AA seq
387 aa
AA seq
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METSAELADVVSRMSAGTGPVAVDAERASGYRYTQRAYLVQLRRAGAGTVLIDPLPLDDL
RTLDAALAESEWVLHAASQDLPCLAELGFRPRRLFDTELAARLAGFERVGLAALTEQLLG
YSLEKHHSAADWSTRPLPDSWLTYAALDVELLTDLRDLLAAELERQGKTAWAAEEFAALV
ASADRPPRVRPDPWRRTSGIHRVRGARAQSRVRALWYARDGVAARRDSAPGRVLPDSAII
AAAEADPKDERTLLGIPGFGGRSVRRLARIWLDALDQARALPDDALPVNQPVEGPPPPHR
WAERDPIAAARLARCRAVVVGTAEQHNLPPENLISPDFIRRLAWSPPDEVTSQTVADTLR
GFGARNWQVGLIAEQLATALPAPDPAD
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
gtggagacctcggccgaactggccgatgtggtctcccggatgtcggcggggaccggaccg
gtcgccgtggacgccgagcgcgcctccggctaccgctacacccagcgcgcctacctggtg
caactgcgccgggcgggcgccggaaccgtcctgatcgacccgttgccgctggacgatctg
cgcaccctcgacgccgcgctcgccgagtccgaatgggtgctgcacgccgcgagtcaggac
ctgccgtgcctggccgagctgggcttcagaccgcgccgcctgttcgacaccgaactggcc
gcccggctcgccggtttcgagcgggtcggcctggccgcgctcaccgagcagctgctcggc
tactcgctggagaaacaccactcggcggcggactggtcgacccgtcccctgccggactcc
tggctcacctatgccgccctcgacgtcgagctcctcaccgacctgcgtgacctgctcgcc
gccgaactcgaacgccagggcaagaccgcctgggccgccgaggagttcgcggcgctcgtc
gcgagcgccgaccggccgccgcgagtccgtcccgatccctggcggcggacgtcaggcatt
catcgggtacggggtgcgcgggcccagtcccgggtgcgcgccctctggtacgcccgtgac
ggcgtcgccgcccgccgcgactccgcccccggacgggtgctgcccgactccgcgatcatc
gcggccgccgaggccgacccgaaggacgagcgcaccctgctcggcatccccgggttcggt
ggccgctcggtgcgccggctggcccggatctggctcgacgcgctggaccaggcccgggcg
ttgccggacgacgcgttgccggtgaaccagccggtcgagggcccgcccccgccgcaccgc
tgggccgagcgcgacccgatcgccgcggcccggctggcccggtgccgcgccgtggtcgtc
ggcaccgccgagcagcacaacctcccgccggagaacctgatcagcccggacttcatccgc
cggctggcctggtcgccaccggacgaggtgacctcccagacggtcgccgacacgctgcgc
ggcttcggcgcccggaactggcaggtgggcctgatcgccgaacagctcgccacagccctc
ccggcccccgacccggcagactga
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