Actinoplanes missouriensis: AMIS_80710
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Entry
AMIS_80710 CDS
T01795
Name
(GenBank) putative UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ams
Actinoplanes missouriensis
Pathway
ams03420
Nucleotide excision repair
ams03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ams00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AMIS_80710
03430 Mismatch repair
AMIS_80710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ams03400
]
AMIS_80710
Enzymes [BR:
ams01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AMIS_80710
DNA repair and recombination proteins [BR:
ams03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AMIS_80710
MMR (mismatch excision repair)
Other MMR factors
AMIS_80710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_16
HMBD
Motif
Other DBs
NCBI-ProteinID:
BAL93291
UniProt:
I0HJV4
LinkDB
All DBs
Position
8709408..8712551
Genome browser
AA seq
1047 aa
AA seq
DB search
MRDVESTAGTYVADLHIHSRYSRACSRDLTLPNLAWWARRKGIALLGTGDFTHPAWFEHL
KESLKPAEPGLFRLAEAEEQAVTRRLPGSLSGTAPARFMLSVEISTIYKRDDRTRKVHHL
LYAPDFASVQKINTALARIGNLTADGRPILGLDSRDLLEITLESGGYLIPAHIWTPWFSA
LGSKSGFDAIADCYADLADHVTAVETGLSSDPEMNWRVSSLDRYRLVSNSDAHSPAALAR
EATLFSGTPDYFAVKDGVGLAGTIEFFPEEGKYHADGHRACGVNWEPSRTREAAGRCPEC
GRPLTIGVQSRVEDLADRPVGFRKEQHVEHLIQLHEILGEINGVGPKSKTVEAQLNHLVA
TLGPELEILRHVPVDEIGKAGGEELREAITRLRRGDVRRVPGYDGEYGVITLFEPGELRN
RNSAPQVETLFDMLPASVPNPPKPKAAPEKPKPKAAKKPAEKPAPPPLAPPPSPHEPFEP
MLAGMEEVGTGLLDRLDAMQRVAASAPGGPLLIVAGPGTGKTRTLTHRIAYLCAELGVFP
ERCLAITFTRRAATELKERLDALLGDVAEDITVGTFHSLGLTVLKENAKAAGLGANWRIA
DEHEQAQAREQAGTDDAGYRKLLRQQDLVDLDDLISLPVTLLREDPALVERYRRRWQWIF
VDEYQDVDELQYELLRLLSPPDGNLCAIGDPDQAIYSFRGADVRYFLRFNTDFVDARLVR
LTRNYRSSAPILAAAVQAIAPSTLVSGRRLDPARLDPEAPLVGRYPARSVSDEADFVVRT
IDELVGGLSHRSLDSGRVDSRAAVAGTLSFSDVAVLYRTDAQSGPILDALSRAGVPVQKR
SHNRLRHRPGVQVIARELRHADGSGGPLAARVRLAAQTLAQRYATPTLDGDQLAPEDVWS
AADLLAPLAERVGDDLPQFLQQLETGAEVDALDPRAEAVNLLTLHAAKGLEFPVVFLVGC
EDGLLPLRWPGSTPTDDEIAEERRLFFVGLTRAQDRLYVSYSAKRSRHGSEREQAPTPFL
DVIDSGLFERLGEAAPAKPKDRQLRLL
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgcgggacgtggagagcaccgcgggaacgtatgtcgcggaccttcacattcactcgcga
tactcgcgggcctgcagccgtgacctgaccctgccgaacctggcgtggtgggcccggcgc
aaggggatcgccctgctcggcaccggcgacttcacccatccggcctggttcgagcatctg
aaggagagcctgaaaccggccgagccgggcctgttccgcctggccgaggccgaggagcag
gcggtgaccaggcggctgcccggatcgctgagcggcaccgcgccggcccgcttcatgctg
agcgtcgagatctccacgatctacaagcgcgacgaccggacccgcaaggtccaccacctt
ttgtacgcccccgacttcgccagcgtgcagaagatcaacacggcgctggcccggatcggc
aacctgaccgcggacggccgcccgatcctcggcctggactcccgcgacctgctggagatc
accctcgagtccggcggctacctgatccccgcgcacatctggacgccctggttctcggcg
ctcggctccaagtccggcttcgacgcgatcgccgactgctacgccgacctggccgaccac
gtcacggcggtggagaccggactctcctcggacccggagatgaactggcgggtctccagc
ctcgaccgctaccgcctcgtgtcgaactccgacgcgcactcgccggccgcgctggcccgg
gaggcgacgctcttctccggtacgcccgactacttcgcggtgaaggatggggtcggcctg
gccggcacgatcgagttcttcccggaggagggcaagtaccacgccgacgggcaccgcgcc
tgcggcgtgaactgggagccgtcgcggacccgcgaggcggccggccgctgccccgagtgc
ggccgcccgctgaccatcggcgtgcagagccgggtcgaggacctggcggaccgtccggtg
ggcttccgcaaggagcagcacgtcgagcacctgatccagctgcacgagatcctcggcgag
atcaacggtgtcggcccgaagtcgaagaccgtcgaggcccagctgaaccatctggtcgcg
acgctcggcccggaactggagatcctgcgtcacgtgccggtcgacgagatcggcaaggcc
ggcggcgaggagctgcgcgaggcgatcacccggctgcggcgcggcgacgtgcgacgcgtc
cccgggtacgacggcgagtacggcgtgatcaccctgttcgagcccggtgagctgcgcaac
cgcaacagtgctccgcaggtggagacgctcttcgacatgctgccggcgtcggtgccgaac
ccgccgaagccgaaggccgccccggagaagccgaagcccaaggccgcgaagaagcccgcg
gagaagcccgcgccgcccccgctggcgccgccgcccagcccgcacgagccgttcgagccg
atgctggccgggatggaggaggtcggcaccggcctgctggaccgcctcgacgcgatgcag
cgcgtggccgcgtccgcgcccggcggcccgctgctgatcgtggccgggccgggcaccggc
aagacccgcacgctgacgcaccggatcgcgtacctctgcgccgagctgggtgtcttcccg
gagcggtgcctggccatcacgttcacccggcgtgccgccaccgagctgaaggagcggctg
gacgcgcttctcggggacgtggccgaggacatcacggtcggcacgttccactcgctgggc
ctgaccgtgctgaaggagaacgccaaggcggccgggctcggcgccaactggcggatcgcc
gacgagcacgagcaggcgcaggcccgcgagcaggccggcacggacgacgccgggtaccgc
aagctgctccgccagcaggatctggtcgacctggacgatctgatcagcctgccggtgacg
ctgctgcgcgaggaccccgcgcttgtcgagaggtaccgccggcgctggcagtggatcttc
gtggacgagtaccaggacgtcgacgagctgcagtacgagctgctgcgcctgctcagcccg
ccggacggcaacctgtgcgcgatcggcgacccggaccaggcgatctactcgttccgcggc
gccgacgtccggtacttcctgcgcttcaacaccgacttcgtggacgcccggctggtccgg
ctgacccgcaactaccggtcgtcggcaccgatcctggccgccgcggtgcaggccatcgcg
ccgtccacgctcgtcagcggccgccggctggacccggcccggctcgacccggaagccccg
ctggtcggccgctatccggcgcgcagcgtctccgacgaggccgacttcgtggtgcggacc
atcgacgagctggtcggtggcctctcccaccgttcgctggactcgggccgggtcgactcc
cgcgccgcggtggccgggaccctgtccttctcggacgtcgcggtgctgtaccgcaccgac
gcccagtccggtccgatcctggacgcgctgtcccgcgccggcgtgccggtccagaagcgc
tcgcacaaccggctgcgccaccggccgggcgtccaggtgatcgcccgcgagctgcggcac
gcggacggctctggcggaccgctcgcggcacgggtccggctcgctgcccagacgctcgcc
cagcggtacgcgacaccgacgctcgacggcgaccagctggcccccgaggacgtgtggtcg
gcggccgacctgctggcgccgctggccgagcgggtcggtgacgacctgccccagttcctg
cagcagctggagaccggcgccgaggtggacgcgctggacccgcgtgccgaggcggtcaac
ctgctcaccctgcacgccgcgaagggcctggagttcccggtggtcttcctggtcggctgc
gaggacggcctgctgccgctgcgctggcccggctcgacgccgaccgacgacgagatcgcc
gaggagcggcggctcttcttcgtcggcctcacccgggcgcaggaccggctctacgtgagc
tactcggcgaagcggtcccggcacggcagcgagcgggagcaggcgcccacgccgttcctc
gacgtgatcgactcgggcctgttcgaacggctcggtgaggcagcaccggcaaaaccgaag
gaccgccagctcagactgctgtga
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