Alkaliphilus metalliredigens: Amet_0010
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Entry
Amet_0010 CDS
T00551
Name
(GenBank) phage transcriptional regulator, RinA family
KO
K03090
RNA polymerase sigma-B factor
Organism
amt
Alkaliphilus metalliredigens
Brite
KEGG Orthology (KO) [BR:
amt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amt03021
]
Amet_0010
Transcription machinery [BR:
amt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Amet_0010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
KORA
Sigma70_ECF
LacI
HTH_Tnp_ISL3
HTH_3
GerE
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
ABR46253
UniProt:
A6TJ85
LinkDB
All DBs
Position
10116..10916
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AA seq
266 aa
AA seq
DB search
MKNIARANKMALNRDHSLMHLTEKELFIEYQENKKVEVRNELVNRYLYIAEILSKKFLNK
GIDYEDIYQVASLGLIYAIERFDLSRGFEFSSFATPTIIGEIKKHFRDKGWSIRVPRRIQ
ELSKKVNTAKMTLHQNLQRTPMIKDIAEYLNCTQEEVMEAMEASQVYTPKSLDLTYDNDG
EDKDIQLIDLIGEKDKNFDEIENRDFLKKAMRNLNEVEKKVLEDRFFNSKTQMNVAEELN
VSQMTVSRMEKRIIEKFRKELNKSME
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacatagcaagggctaataaaatggctcttaacagagatcactccctaatgcat
cttactgaaaaagaactctttattgaatatcaagaaaacaaaaaagttgaagtgagaaat
gaactggttaatcgttatctatatatcgcggaaatactatcaaagaagtttctaaataaa
ggaattgattatgaagatatttatcaagttgcttctttaggtttaatttatgcaattgaa
agatttgatctaagtcgaggttttgagttttcaagttttgccacaccaacgattattgga
gagataaagaagcactttagagataaaggctggtctattagagttccgagaagaatacaa
gagctttctaaaaaagtaaatacagcaaaaatgacactgcatcaaaatcttcaaagaacc
ccgatgattaaagatattgctgaatatttgaattgtacgcaagaagaagtgatggaagca
atggaggcaagtcaagtttatacgcctaagtccttagacttaacttatgataatgatggg
gaagataaggatatccaattaattgacttaataggagaaaaggataagaattttgatgaa
attgaaaatcgagattttttgaagaaagcaatgagaaacttaaatgaagtagaaaaaaag
gtgttagaggataggttctttaatagtaagacacaaatgaatgttgcagaagaattaaat
gtatcacagatgactgtctctaggatggaaaagagaattatagagaaatttagaaaagaa
ttaaacaagagtatggaatga
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