Alkaliphilus metalliredigens: Amet_0087
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Entry
Amet_0087 CDS
T00551
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG family
KO
K03093
RNA polymerase sigma-I factor
Organism
amt
Alkaliphilus metalliredigens
Brite
KEGG Orthology (KO) [BR:
amt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amt03021
]
Amet_0087
Transcription machinery [BR:
amt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Amet_0087
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
PACT_coil_coil
Motif
Other DBs
NCBI-ProteinID:
ABR46330
UniProt:
A6TJG2
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All DBs
Position
105104..105847
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AA seq
247 aa
AA seq
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MTKLFKILKKRKTIEERIRDIQEGNEEEKNSIIQEHIPFIKKILSQQLGRYIEIENDDMF
SIGLMAFNEAIDKYETSRGKFLSFAAIVIKNRSIDQLRKQSRTSNEVIVSQMIGDDGEAS
STDHMASVESFENRVEAKVDMGIFIKRMAEFQVTLDDLINEAPRHMDTRLNAIKIGRYVH
ENHQLKEKLLRRKKLPTSELMKELMVSKKVVQGSRKFIIAVILILDSNLDTMKEYISQVE
GGDYIDE
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
gtgacaaaactcttcaaaatcttgaaaaagagaaagacaattgaggaacgaatccgagac
attcaagaaggaaatgaggaagaaaaaaatagcatcattcaagagcacatcccctttatt
aaaaagatcctgagccagcagctaggaaggtatattgaaatagagaatgacgatatgttc
agtattggattaatggccttcaatgaagccatcgataaatacgaaaccagcagaggtaaa
tttctctcctttgccgccattgtcatcaaaaatcgctctattgaccagctaagaaaacag
tccaggacttcaaatgaagtgattgtgagtcaaatgataggggatgatggtgaggcatct
agcactgatcatatggcttcagtggagagctttgaaaatcgtgtagaagcaaaggtggac
atgggaattttcattaagagaatggcagaatttcaagtaacattagatgatttaatcaat
gaagcaccaagacatatggatacacgactcaatgccattaaaattgggagatatgtacat
gaaaatcatcaacttaaagaaaagttactacgtcgcaagaagcttcctacaagtgagctc
atgaaggaattaatggtgtctaaaaaggtggttcaggggagtcgtaagtttattatagcc
gttatcctcattttagatagtaatttagatacaatgaaagaatatatttcccaagttgaa
gggggggattacattgatgaataa
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