Alkaliphilus metalliredigens: Amet_0722
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Entry
Amet_0722 CDS
T00551
Name
(GenBank) helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
amt
Alkaliphilus metalliredigens
Pathway
amt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Amet_0722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amt03400
]
Amet_0722
Enzymes [BR:
amt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Amet_0722
DNA repair and recombination proteins [BR:
amt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Amet_0722
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
AAA_11
Viral_helicase1
HHH_5
PIF1
AAA_22
RsgA_GTPase
HHH_2
HHH
PhoH
AAA_28
nSTAND3
T2SSE
AAA
NAT10_TcmA_helicase
DEAD
UvrD-helicase
SLFN-g3_helicase
ATPase_2
AAA_24
SRP54
TrwB_AAD_bind
HerA_C
Rad17
AAA_7
NPHP3_N
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ABR46947
UniProt:
A6TL79
LinkDB
All DBs
Position
769231..771495
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AA seq
754 aa
AA seq
DB search
MRVTGGSAVVELEGQLVEIIFQNESNGYMVGILEAKEEIATIVGCLPAIKEGEQLAVKGK
WAVHPVYGRQLEVGEYRPIQPSTKEGILNYLSSGVIKGVGKKMAERIVDLFGMDSLEVIQ
YAPERLREVEGIGRAKAETITETFRDQKELREIILFLSEYHITPNYAVKIHKKYGDKTIA
TIQENPYRLADEIVGIGFKRADAIARNMGVHPHSKYRIHSGIKYMLNTFQGEGHTYAPGV
KLIQRAEELLRVEEGQVEGAIQELALNQEIQLERIDDEIIVYSMPYYYAESNVCKKLISL
AQVELDPIEMDIDEELQKIEQAEEMTLAKQQKEAIKEAIENGISVITGGPGTGKTTTINS
LIKVFEKLELKMLLAAPTGRASKRMTEATGKESKTIHRLLELGFGDDREGMLFQRNEDNP
LDCHVIIIDEVSMVDIILMNSLMKSIARGTRVVLVGDVDQLPSVGAGNVLRDIIDSKVVK
TIRLTEIFRQAQESMIVVNAHRINQGLYPQLNEKQKDFYFMKRNAKEDVLATVVELVRDR
LPKHYQFDALRDIQVLTPMKKGETGTLNLNKELQAALNPPNVSKAEKDLKEKIFREGDKV
MQIKNNYTLKWRCLDPMAEEQKGEGVFNGDIGYVQSIDTEAEELVILFDDQKQVNYSFTQ
LDELELAYSVTIHKSQGSEFPVVVIPITWGPPMLLTRNLLYTAVTRARSLVVLVGVESYL
KKMVDNNKIIERYSGLGRRLGKYFEMQIKDETKI
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtaacaggaggaagtgctgtggttgagctagaaggacagttagtggaaatcatt
tttcaaaatgaatccaatggatatatggtagggattttagaggcaaaagaagagatcgcc
acaattgtaggctgtttgcctgccattaaagaaggagaacaattggctgtaaaggggaaa
tgggcggtgcatcctgtctacggcagacagctagaggtaggggaataccgtcccattcaa
ccctccacaaaggaagggatcttaaattacttatcctcaggagtcatcaaaggcgtggga
aaaaagatggcggagcgaattgtggatctatttggaatggattctttggaggtgattcaa
tatgccccagaacgattgagggaggtagagggtattgggcgagctaaggcggagaccatc
accgagacctttagggatcaaaaggagctcagggaaatcattctctttctttcggagtat
catatcacccctaattatgcagtaaagatacataaaaagtatggagataaaaccatcgcc
actattcaagaaaatccctatcggttggcggatgaaattgttgggattggttttaaaaga
gccgatgccatagctcgaaatatgggggttcatccccattcaaaataccgaattcattca
ggaattaaatatatgttaaacacattccaaggggaaggtcatacctatgcaccgggtgtt
aagctaatccaacgggcagaggagctactcagggtagaagaaggtcaggtagaaggcgcc
atccaagagcttgccctgaatcaggaaatacaattagaacgaattgatgatgagattatc
gtttattctatgccctattattatgcagagtctaatgtatgtaaaaagctcatcagttta
gctcaagtagagttagaccccatcgaaatggatattgacgaagaactacagaagattgaa
caagcagaagagatgacactggcaaagcaacaaaaagaagccatcaaagaagcaatcgag
aatggaatttcagtcattactggaggtccgggaacaggaaagacaacaaccatcaatagt
ctgattaaggttttcgaaaagttagagttaaagatgctattggcagcccccacaggcaga
gcctctaaaagaatgacagaggccactggaaaagaatcaaaaaccattcaccggttattg
gaattgggatttggagatgaccgtgaaggcatgctttttcaacgaaatgaagataatccc
ctagattgtcatgtcatcatcattgatgaagtgtccatggtggatattatattaatgaat
agcctaatgaagtccattgctagggggactcgggttgtattagtaggagatgtagatcag
cttccctctgtgggtgctggaaatgtacttcgagacattattgacagcaaggttgtgaag
accattcgactaacggaaattttccgtcaagcccaggagagcatgattgtcgtcaatgcc
catcgaatcaaccaggggctctatccacaattaaatgaaaagcaaaaggatttttatttt
atgaaacgaaatgccaaggaggatgttttagccaccgtagtggaattggtgagagaccga
cttcctaagcactatcagtttgacgccctacgtgatattcaagtgctgacacccatgaaa
aagggggagactggaacactaaatctgaacaaagagcttcaggcagctttgaatcctcca
aatgtatccaaggcagagaaggatctcaaggaaaagatcttccgagagggagacaaggta
atgcaaattaaaaataactatacattaaagtggcgctgtctagatcccatggctgaagaa
caaaagggggagggtgtcttcaatggagatattggatatgtccaaagcatcgatacagag
gcggaagagttggtcatactatttgatgaccaaaaacaagtcaactacagctttacccag
ctagatgaattggaactggcctactccgtcaccatccacaaaagtcaaggaagtgagttt
cccgttgtagtcattcccattacatggggaccccctatgttattaactcgaaatctactc
tacaccgcagtaacccgagccagatccctggtggtattggtcggggtggaaagctattta
aaaaaaatggtggacaacaataaaattattgagcggtactctggactagggagacgtttg
gggaaatactttgaaatgcagattaaggatgaaactaaaatttga
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