Alkaliphilus metalliredigens: Amet_0941
Help
Entry
Amet_0941 CDS
T00551
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
amt
Alkaliphilus metalliredigens
Pathway
amt03420
Nucleotide excision repair
amt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Amet_0941
03430 Mismatch repair
Amet_0941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amt03400
]
Amet_0941
Enzymes [BR:
amt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Amet_0941
DNA repair and recombination proteins [BR:
amt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Amet_0941
MMR (mismatch excision repair)
Other MMR factors
Amet_0941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
DUF3553
ResIII
Tudor_1_RapA
Motif
Other DBs
NCBI-ProteinID:
ABR47161
UniProt:
A6TLU3
LinkDB
All DBs
Position
976904..979078
Genome browser
AA seq
724 aa
AA seq
DB search
MNLTHLNDEQRKAVEHTKGPLLLLAGAGSGKTRVLTHRIAYLVEELGVSPYHILSITFTN
KAAREMKERIHQLLGDGFRDLWVSTFHSSCVRILRSEIDKLGYSKNFVIYDTTDQQIVIK
ECLKKLNLDDKMYQPRAVLAEIGKAKDQLMGPKEFQQEVQGRDFRKEKIATIYEMYQNKL
RSNNALDFDDLIMKTVQLFLTHPPVLAFYQEKFKYILVDEFQDTNMAQYTLVSLLAKKHH
NLCVVGDDDQSIYGWRGADIRNILGFEKDFPNTRVIKLEQNYRSTKNILSAANAVVAKNS
ERKDKKLWTDNIPGEVIQYYKASNEYDEAGYITNAIDEMKETETRSYNDFAILYRTNAQS
RTLEELLMKKAIPYRLLGGTRFYDRKEIRDILAYLKIIENPVDDVNVKRIINVPKRGIGL
RSIEKLEIHADERESSFFNALLDVELMPDLSTRVKVQSSKFTQMITSLRDIKDEVPVTTI
VKEIYKQSEYIDELHKEDTVEAKGRIENLEEFLSLTKDFDENAEIKTLEEFLARTSLETS
LDLMDEDEAAVVLMTLHSAKGLEFPVVFIPGMEEGIFPSSMSLQENNEEEERRLCYVGIT
RAMEKLYLSHAMMRTLYGRTNANAVSRFIREIPEELITMEKPYNRQQEVRKMQTSPLFNG
GGMYQKPVKQENITGEIKTGMKIKHPKFGVGTVVAASGEMLTIAFPNAGIKKISTAFTQL
EVIK
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaactcacttaaatgatgaacagcgaaaggcagtagagcatacaaaggggcca
ctacttctattggcaggggcaggatcggggaaaaccagagtactcacccatcgaattgcc
tacctagtagaagaactaggtgtttccccatatcatattttgtctatcacctttaccaat
aaagcagcccgtgaaatgaaggagcgtattcatcagctcctgggagatggttttcgggac
ttatgggtcagtacattccattcctcctgtgtacggattttaagaagtgaaattgacaag
cttgggtatagtaaaaactttgttatttatgacaccacagatcaacagattgtcatcaaa
gagtgtttgaaaaaattgaatttagacgataagatgtatcaacccagagctgtattggcg
gaaattggaaaggccaaagatcaactaatgggacccaaggaatttcaacaagaggttcag
gggagggactttagaaaagaaaaaatagcaaccatttatgaaatgtatcaaaacaagttg
agaagtaataacgccctagactttgacgacttgattatgaagacagttcaattgttttta
acacatccaccggttttagctttctaccaagaaaagtttaaatacatattggttgatgag
tttcaggatacaaatatggctcaatatacattggtcagcctattggctaagaaacatcat
aatctttgtgttgtaggagatgatgatcagtcaatctatggatggcgtggtgctgatatt
cgcaatatattaggatttgaaaaggattttcctaataccagggttattaaattagaacaa
aattatcgatccactaaaaatattttatctgcagccaatgcggtggtggctaaaaattca
gaacgtaaggacaaaaaactttggacagataatattccaggagaggtcattcagtattat
aaggccagcaatgaatatgatgaggcagggtatattaccaatgcaattgatgaaatgaag
gaaacggagacgcgttcctacaacgatttcgccattttatatcgaacaaatgcccaatcc
aggacattagaggaattgttaatgaaaaaggcaatcccctatcgattactgggaggaaca
cgattttatgatcgaaaggaaattagagatattttagcttacttgaaaatcattgaaaat
cctgtggatgatgtcaatgtcaaacgaattatcaatgtacccaagcgggggattgggtta
aggagtattgaaaagctagaaatacatgcggacgaaagagagtcaagcttctttaatgcc
ctattggatgtagaactgatgccggatctctctacccgggtgaaggtacaatcaagtaaa
tttactcaaatgattacgagcctacgagacataaaggatgaagtgcctgtaacaaccatt
gttaaggaaatatataagcaatcagaatatattgatgaactgcataaggaagacacagtg
gaagctaagggacggattgaaaacttagaggaatttctctccttaaccaaggattttgat
gaaaatgcagaaataaaaacattggaggaatttctagctaggacctctctagaaacctcc
ttagatctaatggatgaggacgaagcagctgttgtgctcatgacacttcatagtgccaaa
ggacttgaatttccagtggtctttatacctggaatggaggaagggatctttccgtcatcc
atgtccctacaagagaataatgaggaagaggagcgccggctctgttatgtgggaattacc
agagcaatggaaaagctttatttaagtcatgcaatgatgaggacattatacggtagaacc
aatgccaatgcagtttctagatttattcgagaaattccagaggaactcatcaccatggaa
aaaccctataatcggcagcaagaagttcgaaaaatgcaaacttcacccctatttaatgga
ggcggaatgtatcaaaaacccgttaaacaggaaaatataacaggggagattaaaacagga
atgaaaatcaaacatccaaagtttggtgtgggaacagtggttgccgcatcaggagaaatg
ttgacaattgcttttccaaatgcagggatcaagaaaatttctactgcctttacacaatta
gaagtgattaaataa
DBGET
integrated database retrieval system
