Alkaliphilus metalliredigens: Amet_1534
Help
Entry
Amet_1534 CDS
T00551
Name
(GenBank) cell wall/surface repeat protein
Organism
amt
Alkaliphilus metalliredigens
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4347
SLH
Flg_new
Cadherin-like
Cadherin
Cadherin_4
Motif
Other DBs
NCBI-ProteinID:
ABR47724
UniProt:
A6TNF6
LinkDB
All DBs
Position
1602510..1609385
Genome browser
AA seq
2291 aa
AA seq
DB search
MRLKYEYMIALIILIVICLGMPVFATASVGLEGESTEVAIVDTSVQDYKILVESAKNAGL
EVILIGEGEGVKDLAEALEGRSNIDALHIFSHGDVGQVFLGGDVLSSETLEVHANTLARI
GASMTATGHILLYGCNVAQGEVGSVFIEDMARITQADVAASNDPTGAAALGGDWVLEEAT
GEIKAEGLFVDDFNGLLANAVPEIILPTPPAIHEDASNVAISGIYVAGNGSFSSGEIYIL
DNTPPTVTPGNISVTGGSGTGGAYIIGDTVTVTWDNTAGGDNNADVVSVTVDFSELGGGA
AVVATNNASMWKATYNIVAGALNGITNRNVVITATDHVVNVTTVADNANVIVDNVAPGPV
TVQGGGTLSVSETAANGAVVGTVISSGAVTYSLVNNGGGRFAIDAATGEITVADAGSIVY
AHNDSHSITVVASDAAGNMTADTVLTVTVTDASPVLAGTAGSSDWQENTSSGPSWSGDAI
YLFSGASVTSIESNFAEATLIVSFTDGYNVGDFISFHPSIETGAGTLTLDNNDHKLLMDG
QEIATISGGNMSPLVITFNHWATATQVNAVFNHITFTVYGNDNPTNFGANATRAVSAVFQ
DAGSGLTSNPLTGTLTIIPYNDPEILNGTISGTFTEGTGTPLQLVSGAELIQVDNINFDN
GSLMVSLATYQDGDVLGVLQGNDITLDGQNLNHNGINIGTINTLGVNGTPLVINLNENTT
HLRVQDLIDQLVFESTSQNPTNFGTATSRSVTISLDDGAGGTTATSTLTGSITINDLNNP
PEVDLNGAVTGEDSIATFLVEGTAVLIAPEAIVIDWDNTHLSSLTATLANRPNGNGTESL
GLSAAATTAASGAGLYAYYTEESGILSIQGAATVDVYQTILRGIQYHNGIETMSANTADR
VITIVASDGEDTSISRTATVSLVTAPIIGDLSSTPVAHVEDGGAVLMAAGATIVELDGDN
LNRLLITLTNPQDGVDEAITLAGRTSGDEANGITITYTSNTVITLTGIASASEYQALLRE
LQYANASSGPETATVREIIVQGRDEHNNDGGIATVQVQPVNINNAPVLVTTELMLTSTNE
NTVTDPIAVSSFLDATDDDRDPLEGIVITEAVGNGEWEYSTGGNWSTIDVVNQNSALLLR
STDYIRYVPDGQNGETVFVTYRAWDQTSGTVGTKVDVTNNGGTTAFSTNTATATLTVMDV
NDAPVLNPTGVTLTGTDENTSVDFTVESFIESAITDVDIGAVKGTAITATSGNGVWQYST
DVGATWISIGAVNDESSLLLNRAALIRYVPDGVNGETASITYRAWDQTSGTVGTKVDVTN
NGGTTAFSTNTATATLIVTDVNDAPILISGNYSLGNLNITDIGTAIEVDSFIDGAVTDVD
NGALKGIAIVDVTGNGTWQYSTDGFSTWSDIIVVSESNALLLRDSDYIRYIPGGIEETAE
ITYRAWDKTSGVVGGIADTTANGGTTAFSTALATASINAVASTEKEITAITIPAGATIEG
TNIIASVANATSSVIVDVTVSPGAYWTLYSDEECAEEIVDKTMNLYVGTNTAYIKVTAQD
GTTKTYTAVVSRGANPTYTVIYDGNGSTDGTVPTDSNNYEENATVTVLGNTGNLMRTGYT
LVGWNTQANGQGTSYYTGSSFTMGAENATLYAKWIDSTSIRMTANPDNVKGNINFDQTFI
LNLSNDTVTGSVYADDINLGDVFSTLNISSVNNSSNTVTLAVYGSLSTQGIGTISLNENS
LNNSTTPLIAEVVVSLNTATYHGNGETGGSIPTDSNVYEEGATVTVLGNTGNLVKTGYTF
AGWNTQANGQETSYTQGSTLIMSTTNINLYAMWTKTSSGGGSSGGSTGGNIRPTPTPEPA
TETEEVVIINGEAQTVGKETVIEQDGEKIVELRTDSNVLSQKIDEVITLNQTEGIQGPNI
LEIPVSTQGANQIRSVLTGDIIKKMEDNQFILIINTEKVDYVIPVREIDIEKVADILNVD
PTSLHEIEIEIRITYSNEIKANEIIQRGRAQGIEVIMQPMEFEIVAKTTNNQGEEQETTV
NQFTSYVSRVMEVPSGVDPNKITTGILYNPDGSFTHIPTNVFMQDNKWYVRLNSLTNSTY
TVIWNPITVAAVENHWSKETVNDMASRLVIKNPDTFKPNQLITRGEFAEYITKALGIYLT
GTVKTTKFSDVPLTHELSDAITIATDYGIISGYPDGTFKPDAQISREEAMTMYAGAMDVV
DLQEIDNNRIHNYIDKDQIATWAYESVKKTVSAGVFSGRTAETINPKDTFTYAEAATAIR
NLLVRAGLIND
NT seq
6876 nt
NT seq
+upstream
nt +downstream
nt
atgagattgaaatatgagtatatgatagctttaattatactaatagtaatttgtctagga
atgcctgtatttgcaactgcttcggtaggattggagggtgagtccactgaagttgcaata
gtagataccagtgttcaagactataagattttagtggaatctgctaagaatgcaggctta
gaggtgattttgataggtgaaggtgaaggcgttaaagacctagcagaagccctcgaggga
cgtagtaacattgatgctttacatattttttcccatggtgatgttggccaggtgtttcta
gggggagatgtgctttcttctgaaactctggaggtccacgctaacacgctggctcgtata
ggggccagcatgaccgcaaccggccacatcctgctctatggctgcaacgtggcccaaggg
gaggtcggtagtgtctttattgaggacatggcacggataacccaagccgacgttgcggcg
tccaatgacccgacgggtgcagcggcactaggtggtgattgggtgcttgaagaagccacc
ggcgagattaaggctgagggcctgtttgttgatgatttcaacggtctgcttgccaatgct
gttcccgaaataattctgcccacccctcctgctatccatgaagatgccagtaacgtggca
atttcagggatttacgtggccggaaatggcagctttagcagtggggagatctatattctt
gataacacccctcccacggtcacgccgggtaatattagtgttacgggaggctccggcacg
gggggagcttatatcatcggtgatacggtgacggtcacctgggacaataccgcaggcgga
gacaataatgcagacgtggtcagcgttactgtggacttcagcgaattaggcggcggtgcg
gcggtggttgccaccaacaacgccagcatgtggaaagctacttataatattgtcgccggg
gccctcaatggcattaccaaccgtaacgtcgtcatcactgccaccgatcatgtggtgaat
gtgaccaccgtggccgataacgctaacgttatagtggataacgttgcgccaggaccggtg
acggtccagggcggtggaacactgtctgtctcggagaccgcggccaacggggcagttgtg
ggcacggtaatatctagtggtgctgtgacttatagcctagtgaataatggcgggggccgc
tttgctatcgatgcagcaaccggggagattactgtggctgatgcaggcagcatcgtttat
gcccataatgacagccactctattaccgtggtcgcctccgatgctgccgggaacatgacg
gcggatacagttctgacggtcaccgtcaccgatgcctctccggttctagccggaacggca
ggcagcagtgactggcaggagaacaccagcagcggtccatcgtggagcggtgatgcgatt
tacctgttctccggcgcttcggtgacctccatagaaagtaactttgccgaggcaaccttg
attgtttccttcaccgatggttacaacgttggggattttatttccttccaccctagcatt
gaaaccggggcgggcaccctgaccctcgataacaatgaccacaaactgttgatggatggt
caagagatcgccaccatcagtggagggaacatgagtcctctggtgatcacttttaaccat
tgggctacggcgactcaggtcaacgcggtgttcaatcacattaccttcacagtatacggt
aatgacaacccgaccaacttcggggccaatgccacccgtgctgtttctgcggtattccag
gatgccggcagtggcttgaccagtaatccgttgaccggcaccctgaccataatcccctac
aacgatcctgagatcctgaacggaaccattagcggtacctttaccgagggcacggggaca
ccgttgcaattagtcagcggggctgaactgattcaggtggacaatatcaattttgacaat
ggatccttgatggtaagccttgccacctatcaagatggggatgtgctaggggtcctccag
gggaatgatatcacgcttgacgggcagaacctcaaccataacggcattaacatcggcacg
atcaatacccttggcgtgaacggtacacccttggtcatcaacctcaacgaaaacactacc
cacttacgcgttcaggatctgatagatcagttggtcttcgagagcaccagccagaacccg
accaacttcggcacggccactagccgtagtgtcaccatcagtctcgatgatggggccggg
ggaaccacggccacatcaacgctgactggcagtatcaccataaatgatctcaataatccg
ccggaggtggacctgaacggcgcggttacgggtgaggacagtatagcgaccttcttagtc
gagggtacagcggtactgatcgcccctgaagccatagtgatagactgggacaatactcac
ctttcctccctgacagccaccttggctaaccggcctaatggcaatggcactgaaagttta
gggctgtcggcagccgctactactgccgccagcggcgccggtctgtacgcttactacaca
gaggagagcggcattctgtcgatccaaggagcggcgacggtagatgtctatcagaccatc
ctgcgtggcattcagtaccataacgggatcgagaccatgtctgccaataccgccgaccgt
gtgattactatcgtggccagtgacggcgaggacacttcgatttcgcgtacagcgactgtt
tccctagtcaccgctcccatcatcggtgacctgagtagcacaccggtggctcatgtggag
gacggtggagcagtgttgatggccgctggggcaaccattgttgaactggatggggacaac
ctcaaccgattgcttatcaccctgaccaatcctcaggacggtgtcgacgaggcaatcacc
cttgcaggtcgtacctccggtgatgaggcaaatggcattaccatcacctacactagcaat
accgtcatcaccctgactgggattgcctctgcttccgaatatcaggctctgctgcgcgag
ttgcagtatgccaatgcttccagtggcccggaaaccgccacggtacgggagattatcgtt
caaggccgtgacgagcataacaacgacggtggtatcgccaccgttcaggttcaaccggtc
aacataaacaacgcaccggtccttgtcaccacagaactcatgctgaccagcaccaacgag
aataccgttaccgaccccattgccgtttcaagcttccttgacgctactgacgacgaccgc
gacccgctggaaggtattgttatcactgaggcggtgggcaacggagaatgggaatattcg
actggaggcaactggagcaccattgacgtggtcaaccaaaattccgcactgttgctgcgt
tccactgattatatccgctatgtgcccgacggacagaacggcgagacggtcttcgttacc
tatcgggcctgggatcaaacctctggcaccgtcggcaccaaggtggatgtgaccaacaac
ggtggaacaactgccttcagtaccaatacagcaactgctactttaacggtgatggatgtc
aacgacgcaccagtacttaatcctacaggggttacattgactggaacagatgaaaatact
agcgttgattttactgtagaatcctttattgaatcagcaataaccgatgttgatatcgga
gctgtaaaaggaacagccattacagctacatcgggtaatggggtatggcaatattcaact
gatgttggggctacatggatatcgattggagcagttaatgatgaatcctcgctgttatta
aatagggctgccttgattagatatgtgccagatggagtcaacggagaaacagccagtata
acctatcgggcctgggatcaaacctctggcaccgtcggcaccaaggtggatgtgaccaac
aacggtggaacaactgccttcagtaccaatacagcaactgctactttaatagtgacggat
gtaaatgatgcaccgatattaatttctggaaattattccttaggtaatttaaacatcact
gatataggcactgcaattgaggtggatagttttattgatggagctgttaccgatgtagat
aatggagcattaaaaggaattgcaatagtagatgtcacagggaatggaacatggcagtac
tctacagacggtttttccacttggagtgacattattgtagtaagcgaatctaatgctctt
ttacttcgggatagcgattatattagatatataccaggcgggatagaggaaacagcggag
attacgtatcgtgcttgggacaaaacttcgggagttgtaggaggtattgctgatacaacc
gctaatggtggaacaacggcctttagtactgcccttgccaccgcatcaattaatgcagtg
gcatcaacagaaaaggaaattacagcaattacaataccagcaggagcaacaatagaggga
acaaacattatagcaagtgtagcaaatgcaacatcaagtgtaatagtagatgtaacagta
agcccgggagcatactggactctttatagtgacgaagagtgtgcagaggaaatagtagac
aaaactatgaacctttatgtagggacaaatacagcctatataaaagtaacagcccaggat
ggaacaacaaaaacatacacagcagtagtgagccgtggagcaaatccaacctacaccgta
atctatgacggcaacgggagcacagatggaacagtaccaacagacagcaataactacgaa
gaaaatgcaacagtaacagtattaggaaacaccggcaacctaatgagaacaggctatacc
ttagttggctggaatactcaagctaatggacagggaacaagctattacacaggttcgtcc
tttacaatgggtgctgaaaatgcaactctgtatgcgaagtggattgattcaactagcatc
agaatgacagcaaatccagataacgttaaaggaaatattaatttcgatcaaacctttata
ttgaacttatctaatgacacagtaacaggttcagtatatgcagacgacataaatctaggt
gacgtgtttagcacattaaacataagttcagttaataatagcagcaatacagtaacttta
gcagtttatggttcattaagtactcagggtataggaacgatatctttaaacgaaaatagc
ttaaataatagtaccaccccgctaatagcagaagtagttgttagcttaaacactgcaact
taccatggcaatggagagaccggaggaagtataccaacagacagcaatgtatatgaagag
ggagcaactgttacagtactaggaaatacaggcaacctagtgaaaacaggctataccttt
gccggctggaatactcaagcgaacggacaagaaactagctatacacaaggatcaacctta
attatgtcaacaaccaatatcaatctctatgcaatgtggacaaaaacctcaagtggtgga
ggttcatcaggcggcagtacaggaggtaatataagacctacacctacaccagaaccagcc
acagagacagaagaggtggtaataataaacggagaagcgcagaccgtcggcaaagaaact
gtaatagaacaagacggagaaaaaatcgtagaacttcgtacagatagtaacgtattaagc
caaaagatagacgaagtaatcaccctaaatcaaacagaaggcatacaaggtccaaatata
ctagagataccagtatcaacccaaggggccaaccaaattcgcagcgtattgaccggagat
attatcaaaaagatggaagacaatcagtttatcttaatcataaatactgagaaagtagac
tacgttatcccagttagagaaatagatatagaaaaagtggcggatatattaaatgtagat
cctacatccttgcatgaaattgaaatagagatacgcataacatatagcaacgaaataaaa
gctaatgaaataattcaacggggaagagcccaaggaattgaagtaataatgcagccaatg
gagtttgagatagtggccaagaccactaacaaccaaggagaggagcaggagacaacagta
aatcaatttaccagctacgtatccagagtgatggaagtaccgtcaggagtggatcccaat
aaaattactactggaatcctgtacaacccagacgggagctttacccatatacctaccaat
gtattcatgcaggataacaaatggtatgttaggttgaactccttgaccaactccacctat
accgtaatctggaacccaattactgtagcagccgtagaaaatcactggtcaaaagaaaca
gttaacgacatggcctcccgactagtgatcaagaatccagacacctttaaaccaaaccaa
ttaatcacccggggggagtttgccgagtacataaccaaagcattaggtatctatcttaca
ggcacagtcaagacaacaaagtttagtgatgtaccgttgacccatgagctatctgatgcc
ataaccatagcaacagactacggcatcatttccggttacccagacggcaccttcaagcca
gatgcccaaatcagccgagaggaagccatgaccatgtacgctggagctatggatgtggta
gatctgcaggaaatagacaataaccgcatacacaattacattgacaaagaccaaatagca
acatgggcctatgagtctgttaaaaagaccgtcagcgcaggagtgtttagtggtcgaact
gctgaaactattaatccaaaagacaccttcacatatgctgaggcagcaactgctattcgc
aatctattggttagagcaggtttaatcaacgattaa
DBGET
integrated database retrieval system
