Alkaliphilus metalliredigens: Amet_1737
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Entry
Amet_1737 CDS
T00551
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
amt
Alkaliphilus metalliredigens
Pathway
amt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Amet_1737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amt03019
]
Amet_1737
03016 Transfer RNA biogenesis [BR:
amt03016
]
Amet_1737
Enzymes [BR:
amt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Amet_1737
Messenger RNA biogenesis [BR:
amt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Amet_1737
Transfer RNA biogenesis [BR:
amt03016
]
Prokaryotic type
tRNA degradation factors
Amet_1737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
KH_2
S1_2
Motif
Other DBs
NCBI-ProteinID:
ABR47913
UniProt:
A6TNZ5
LinkDB
All DBs
Position
complement(1853424..1855532)
Genome browser
AA seq
702 aa
AA seq
DB search
MVKTFEMKLGGRPFVVEIGKVAELAQGSCMIKYGDTTVLVTACASKEPKEGLDFFPLSCD
YEEKLYAVGKIPGGFIKRESRPSEKATLTARLIDRPIRPLFPKGYHNDVQVIATVLSMDQ
DCPPDISAMIGSSIALSVSNIPFMGPTASVSVGMIDGEYIVNPTSKQKEDSTLELIVSGT
KNAIMMIEAGANELTEAQILDAIMFAHEEIKKIVAFIENIVSEVGKPKSEVIAKQMDSNL
LTEVVIFLDTKLANAIKTFDKTERNENIQAVSAEALDYFEEKYEGRSKEVHDILSMLIKV
ETRKMITSEGIRPDNRKLDEIRPISTQVGILPRAHGTGLFNRGETQVLTITTLGDLRDAQ
RIDGIGEEDEKRYMHHYNFPPYSVGETRFMRGPSRREIGHGALVERALLPMIPSKEDFPY
AIRLVSEVLTCNGSSSQASVCGSTLSLMDAGVPIKRMVAGIAMGLIKEDDQVVILSDIQG
MEDALGDMDLKVAGTEEGITAMQMDIKIAGIDRGIMETALEQARIGRLHILNKMKESITS
PRIELSSYAPKVTQIKVHPDKVREVIGAGGKVINKIIDETGCKITIENDGTIYVAAPDQE
SSRRAVEMIELIVKDPVVGEVYTGKVIKIMDFGAFVEILPGKEGLVHISNLAHERVTKVT
DVLAEGDLIEVKLMEINPQGKIGLSRKALLPKPETKSETQSE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaaacgtttgaaatgaaacttggaggcaggccttttgtagttgaaattggtaaa
gtagccgaacttgcccagggatcctgtatgattaaatatggagatacgactgttttagtt
accgcctgtgcatctaaggagcctaaggaaggactggattttttcccattaagttgtgat
tacgaagaaaagctctatgccgttgggaaaatccccggtggctttatcaaaagagaaagc
agacccagtgaaaaggcaacattaactgctagattgattgatagacccattagacctcta
tttccaaagggatatcataatgatgtccaagtcattgccactgttttgtctatggatcag
gattgcccccctgatatttcagcgatgatcggctcctccatcgccctatcggtctctaac
attccatttatggggccaacggcttcggtttcagttggtatgattgacggtgaatatatt
gtgaatcccactagtaaacagaaagaggatagcaccctagagcttatcgtttccggaact
aaaaatgcaatcatgatgattgaagcaggggccaatgaattaacagaggctcaaatttta
gacgccatcatgtttgcccatgaggaaatcaaaaaaatcgttgcttttatcgaaaacatt
gtatccgaagtaggaaaacctaaatcagaagtcattgccaagcaaatggattccaatctc
ttgaccgaggttgtcatcttcctagatacaaaattggcaaatgccattaaaacctttgac
aaaacagagcgaaatgaaaatatccaagctgtttccgctgaagccctggactactttgag
gaaaagtatgaagggcgttcaaaggaagttcatgacattttatcaatgctgattaaagta
gaaacccgtaaaatgattacctccgaaggtattcgtccggacaatcgtaaactagatgaa
attagacctatatcaactcaagtcggtattttacctagagcccatggtacaggtttgttt
aatcggggtgaaacacaggtgttaaccattacgaccctgggggacttacgagacgcccag
cggatagatggtattggtgaagaagatgaaaaaagatatatgcatcattacaattttcca
ccctacagtgttggcgagacccggtttatgaggggtccaagcagaagagaaattggtcac
ggtgccctagttgaaagagcccttctaccaatgattccaagcaaagaagattttccatat
gccattcgactggtatctgaagttctaacttgtaatggttcttcttctcaggcaagtgtt
tgcggtagcaccctttccttaatggatgccggtgttccaattaaaaggatggtagctgga
attgccatgggactcattaaagaagacgaccaagttgtcattctatctgacatccaaggg
atggaagacgccctaggtgacatggatttaaaagtagcaggtactgaagagggtattact
gccatgcaaatggacattaaaatagcaggaatagacagaggcattatggaaacagccctg
gagcaggctagaatcggaagactccatatcttaaacaagatgaaggaatccatcaccagc
cctagaatcgaattatcttcctatgcccctaaggttacccagataaaggttcatccagac
aaagtgagagaagtcatcggagccggtggtaaggtcattaataaaattatagatgagacc
ggttgtaaaatcaccattgaaaatgatggcacaatctatgttgctgcgccagatcaagag
tcttctcgaagggcagtggaaatgattgaactcattgtaaaggaccctgttgtgggtgag
gtttacacaggaaaagtaattaaaatcatggattttggtgctttcgtagaaattctacca
ggcaaggaaggattagttcacatttctaatttggcccatgaaagagtgactaaagtaaca
gatgtccttgctgagggtgatctaattgaagttaaattaatggaaattaacccccaaggg
aaaataggtctatccagaaaagccctactaccaaagccagaaacgaaaagtgaaacacaa
agcgaataa
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