Alkaliphilus metalliredigens: Amet_2202
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Entry
Amet_2202 CDS
T00551
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
amt
Alkaliphilus metalliredigens
Pathway
amt03420
Nucleotide excision repair
amt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Amet_2202
03430 Mismatch repair
Amet_2202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amt03400
]
Amet_2202
Enzymes [BR:
amt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Amet_2202
DNA repair and recombination proteins [BR:
amt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Amet_2202
MMR (mismatch excision repair)
Other MMR factors
Amet_2202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_12
AAA_30
AAA_11
DEAD
ResIII
RICTOR_N
phiKZ_gp29PR
Lock_Gag1-like
Motif
Other DBs
NCBI-ProteinID:
ABR48360
UniProt:
A6TQ92
LinkDB
All DBs
Position
2283915..2285951
Genome browser
AA seq
678 aa
AA seq
DB search
METEENALLNDQQIEAIKHLNGPCMVYAGPGSGKTRVITERVSYLINVGHVNPREILVIT
FTKAAAEEMKNRFAKDESVEDSKKRQVTFGTFHSIFFRMLKSYCGYNLENILNEGEKFNV
IKNIVRTLDVGNHDEEELIKDLILDIGKWKNNLFNRGEFIPKTLESSEFKRVLDSYENFK
VDHGKIDFDDMLTKCYDLLRARPGVLEHVRNQYQYILIDEFQDINGVQFETIKLMAEPLQ
NLFVVGDDDQSIYSFRGANPQIILNFHDIYPKAQKITLNMNYRSQENIIKSANQLIKQNK
CRVEKQIIPTVKANSEIQYSEPKNREEENRTICQFIELLMSEGYSYKDIAIIYRTNLLAG
SLVDSLLDRNIPFVSRDHIYNVFEHWIAKDIIAYLKGAFNYYDYDSLMRIINRPTRYITK
NAMRKAQTYHKDFITALKVKGELMPYQNKNIADLSYHLNNIKYLTTKEAIKYIRKDIGYD
RHIENYCAEKRIRCEGLIETLNELEEASSRHEKIDGFLTHIKDMKSSLSQKSFHRTEEEQ
VELLTMHSAKGLEYKVVIILGAIEGVIPHHKSMDTLEDIEEERRLFYVAMTRAKERLYIS
SSLIRYEKPTEPSRFINEIRQNDNKKGSFVIGQEVEHKTFGKGLIEQISEKIMKVRFYRI
KQVKPLDIDTCIHHKIVK
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgaagaaaatgcattactaaatgatcaacaaatagaagcaatcaaacacttg
aatggtccttgtatggtgtatgcgggaccaggatctggaaaaaccagggtgataacggaa
agggtctcttacttaattaatgtgggacatgttaatcctagggaaatactagtgattacc
tttactaaggccgcagctgaagagatgaaaaatcgttttgctaaggatgaaagtgtggag
gacagtaaaaaaagacaggtcacctttggaacattccattccattttttttaggatgtta
aagtcctactgtggatataatctagaaaatattttaaatgaaggcgaaaagtttaatgtg
attaaaaatattgtgaggacattggatgtaggaaaccacgatgaggaagagctcatcaag
gatttgattttagatattggaaagtggaaaaataatttattcaatcgaggcgaatttatc
cctaagactttagaatcatcagagtttaaacgggtgttagatagttacgaaaattttaaa
gtggatcatgggaagattgattttgatgatatgctaacgaagtgctacgacttactacgg
gctaggcctggtgttctagaacatgtacggaatcagtatcagtacattttaattgatgaa
tttcaggacatcaatggtgttcaatttgaaacaattaagttgatggcagaaccgttgcaa
aacttatttgtggtaggagatgacgatcaatctatttatagttttaggggggctaaccct
caaatcattttaaactttcatgatatttacccaaaggcacaaaaaattactctaaatatg
aattatagatctcaggaaaacatcattaagtcggcaaatcaattaatcaagcaaaataag
tgtcgggtagaaaaacaaatcataccaacggtcaaagccaattcagagatccaatatagc
gagccgaaaaatagggaagaggaaaatcgcaccatctgtcaattcattgagttgcttatg
agtgagggatactcttataaggatattgccatcatttatcgtacaaaccttttggctggc
tcacttgtggactctttattagataggaatattccctttgtttctagagatcatatctat
aatgtttttgagcattggatagctaaagacatcattgcatacttgaagggcgctttcaat
tactatgattacgactccttaatgcgcattattaatcgccccacaaggtatatcactaaa
aatgccatgaggaaggcccagacatatcataaagattttataacggctttgaaagtaaag
ggagaattaatgccctaccagaataaaaatatagcggacttatcataccacttaaacaat
attaaatatcttacaactaaggaagcaattaagtatatacgaaaagacataggatacgac
aggcatattgaaaattattgtgcagaaaagcgaattaggtgtgaaggcttgattgaaacc
ttaaatgaattagaagaagcttcaagtagacatgaaaagatagatggatttttaacacat
ataaaagatatgaagagttcattatcccagaaaagttttcatcggacagaagaagagcaa
gtagaacttttaacaatgcatagtgcaaaagggcttgaatataaagtcgtgatcatcctt
ggtgctattgaaggggtgattccccaccataaaagtatggacactcttgaggatatagag
gaagaacgaagacttttttatgtggctatgacaagggcaaaggagaggctctatattagt
tcttccttaattagatatgaaaaacctactgaaccatcgcgttttatcaatgaaatccgt
caaaatgataataaaaaaggatcctttgtgattgggcaggaagttgaacacaaaacattt
ggcaaaggattaatagaacagatatcagaaaaaataatgaaggtgagattttatagaata
aagcaggtgaaacccttagatattgatacttgtatccaccataagatcgtaaaatag
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