Alkaliphilus metalliredigens: Amet_2293
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Entry
Amet_2293 CDS
T00551
Name
(GenBank) penicillin-binding protein, transpeptidase
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
amt
Alkaliphilus metalliredigens
Pathway
amt00550
Peptidoglycan biosynthesis
amt01100
Metabolic pathways
amt01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
amt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Amet_2293
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Amet_2293
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
amt01011
]
Amet_2293
Enzymes [BR:
amt01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Amet_2293
Peptidoglycan biosynthesis and degradation proteins [BR:
amt01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Amet_2293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
ABR48450
UniProt:
A6TQI2
LinkDB
All DBs
Position
2360676..2363528
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AA seq
950 aa
AA seq
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MIFKKLQDRFNVMILIVATIFIAIAFQLASIMLVQGDHYREQAENRIVKSIPATAARGEI
RDRYGRLLAGNRPSFTLQIMKNEVVDESINEVALKLIEILEEDDNRYNDDFPIVFTEEGD
YAFTYDMEIESWKMRHSLEEVKSAVDAFEILRRRYDIQGDVTIEEIVEAEENRIALEIQQ
QFIEIPNLSVPISILTWKFIDEMRKDQWLQGYHITDFEVSAYDAFKMLREEIYKIPETYS
DLEARKIMVVREHLRNQGYLQYQPVKLAQDISASAVAQIEENIYDLPGVNIAVEPIRYYP
NDKLASHLLGSLGKISQQHEIDRFVRELNYLASDIIGKTGLEHSFEETLKGKDGSQRMIV
DARGRLIDVVERKEPIPGDTLYLTIDANLQRVAEETLEEVLTTLQAGGIYESRWGNTNYL
GTSGRMSNATSGSVVVTDVKTGELLALANYPSYDPNNFATGISMTDWQALMPENERDPLA
PRPLQNIALSTAIQPGSTFKMAVGLAGIDQGLSPKYEILDRGFIQVGGHSFGNWLWNTRR
GTMGRQNLAQAIAQSNNYYFYSLANGYDYGSSRPLPIRMNMDILVDYTKKLGLDERTGIE
IQVPRERSGGVPSIENKLRTVKVMLRNHLNRQMSVEDLDETKVEVSRIVLDEIIEQIVDW
ADENPSRGVLYNRLLELGLREEKVSLYTDIVKYSYYNQARWSVADTMNFAIGQGEHTYTP
IQMTNYMAILANGGYRYNVSTVRKTQSFDGSNTMLYPPELVEKIELNDYGNLDEVNYGML
MVTESSISNIGSARNYFNQFPIKVAAKTGTAQRSGKIPPIDEEVYLKQHMRSFQVSEEAV
ALKTDELMEANRDNARFQDRGYAMRQAIKALNPSIKDADLDRFKEDYDHYAWFTGFAPYD
DPEIAITVLIFQGGSGGYGAPILREIVAEYMGLNALEHQEPFMIDNRLAR
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgattttcaaaaaactacaggaccgttttaatgtaatgatattgatagtcgcaactatc
tttattgctattgcatttcaattggcatcgataatgcttgtgcaaggtgatcattatcgg
gaacaggcggaaaacaggattgtaaagagtatccctgctactgcagcacgtggtgaaata
cgtgatagatatggacgcctattagctgggaatcgtcctagctttacgctgcagataatg
aagaatgaggttgtggacgagagtattaatgaagttgcattgaagctcattgagatttta
gaagaagatgataatcgatacaatgacgacttcccaattgttttcactgaagaaggtgac
tacgcttttacctatgatatggaaattgaaagttggaaaatgaggcatagtttagaagaa
gtaaaatctgcagtagatgcctttgagattttaagaagacggtatgatattcaaggggac
gtcacaatcgaagaaatcgttgaagctgaagaaaatagaatcgctcttgagatacagcaa
caatttatagaaatccctaatttaagtgtgccaatttcaatccttacgtggaagtttatt
gatgagatgcggaaagaccagtggcttcaggggtatcatataactgattttgaggttagc
gcgtacgatgcatttaaaatgttacgagaagagatttataaaattcctgaaacatattca
gatctagaggcgcgaaaaattatggttgttagagaacacttgagaaaccaggggtattta
caatatcaacctgtcaaattagcacaggatatttctgcatcggcagtggctcaaatcgaa
gaaaatatatatgatcttcccggtgttaatattgctgtagaacccataagatactatcct
aatgacaagttagcatcgcatttattaggatcattagggaaaatatcacagcaacatgag
attgatcgctttgtcagagaactcaactatttggctagtgatatcattggaaaaacaggt
ctagaacatagtttcgaagaaacactaaaggggaaagatggctcccaacgcatgattgtg
gatgccaggggtagattaattgatgtagtagaaagaaaagagccgattcctggagatacc
ctatatctgacgattgatgccaacttacaaagagtggcagaggaaacattagaagaagtg
ttaacaacattacaagcaggtggtatctatgaaagtcgatgggggaatacgaattattta
ggaactagtggacgcatgtcaaatgccacatctggctctgtggttgtaaccgatgttaaa
actggagaactgctggccttagcaaattatccatcctatgaccctaacaattttgccacg
gggattagtatgactgattggcaagcattaatgcctgagaatgaacgagatcctttggcc
ccaagacctttgcaaaacatcgctctcagcacagccattcagccagggtctacatttaaa
atggctgtagggctggctggtattgaccaagggttaagtcccaaatatgaaattctagat
cgagggtttatccaggtaggaggacactcctttggtaactggttgtggaatacaagaaga
ggaaccatgggacgacaaaacctagcccaagccatagcccaatcaaataattactatttc
tactcattagctaatggatatgactatgggagcagtagaccattgcccatacgaatgaac
atggacatactggtggattacaccaaaaaacttggtcttgatgaacgaacaggaatcgaa
attcaagtaccaagagaaagatccggtggcgttccaagcattgaaaataagctaagaaca
gtaaaagtgatgctgagaaatcacctgaatcgtcagatgagtgtagaagatctggatgag
acaaaggtagaagtgagtagaatcgttttagatgagattatagagcaaattgtcgactgg
gctgatgaaaacccatctcggggagtactctacaatcgactcttagaactagggttaaga
gaagaaaaggttagtttatacacagatattgtgaagtatagttactacaaccaagcaaga
tggagtgtggcagatacaatgaactttgccattggacaaggggaacatacctacacaccc
attcaaatgacaaattatatggctattttagcaaacggaggatatcgatataatgtgagt
actgtcagaaagacgcagtcatttgatgggagcaatacgatgctgtatccacccgagcta
gttgaaaaaattgaactaaatgactatggtaatttagatgaggttaattatgggatgtta
atggtaacagaaagtagcatcagcaacatcggatcagcaaggaattattttaatcaattt
ccaataaaagtggcagctaaaaccggtacggctcagaggtcaggaaaaatacctccaatt
gacgaagaagtttatctgaaacagcacatgagaagcttccaagtgtcagaagaagcagtc
gcgttaaaaacagatgagttaatggaagcgaatcgtgataatgcaagatttcaagataga
ggatatgccatgaggcaagcaatcaaagccctcaatccaagtatcaaagatgctgatttg
gatcgatttaaggaagactatgatcattatgcatggtttacaggctttgcaccctacgat
gatccggaaatcgccatcacagtattgatttttcaagggggatctggaggatatggagct
ccgattcttagagagattgtagctgaatacatggggcttaatgcattagagcatcaagaa
ccctttatgattgataataggttagccagataa
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