Alkaliphilus metalliredigens: Amet_2504
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Entry
Amet_2504 CDS
T00551
Name
(GenBank) exodeoxyribonuclease VII, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
amt
Alkaliphilus metalliredigens
Pathway
amt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Amet_2504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amt03400
]
Amet_2504
Enzymes [BR:
amt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Amet_2504
DNA repair and recombination proteins [BR:
amt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Amet_2504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
FliS
L_thumb_ring_vir
DUF2524
DUF1657
ABC_tran_CTD
Motif
Other DBs
NCBI-ProteinID:
ABR48657
UniProt:
A6TR39
LinkDB
All DBs
Position
2543541..2543768
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AA seq
75 aa
AA seq
DB search
MAKIKFEEGIKKLEEIINQLENKEQGLDDALELFQEGVRLYRICNEKLTEAEEKISVMIE
EGNQLVERPFEGGEE
NT seq
228 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaaaatcaaatttgaagaaggtattaaaaaattagaagaaattattaatcaattg
gagaacaaagaacaaggcttagatgatgcccttgaactttttcaagaaggggtacgattg
tatcggatttgtaacgagaaactaacagaagctgaagaaaaaatttcagttatgatagaa
gaaggcaatcaattggttgaaagaccttttgagggtggggaggaataa
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