Alkaliphilus metalliredigens: Amet_2735
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Entry
Amet_2735 CDS
T00551
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
amt
Alkaliphilus metalliredigens
Brite
KEGG Orthology (KO) [BR:
amt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amt03032
]
Amet_2735
03400 DNA repair and recombination proteins [BR:
amt03400
]
Amet_2735
Enzymes [BR:
amt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Amet_2735
DNA replication proteins [BR:
amt03032
]
Prokaryotic type
DNA Topoisomerases
Amet_2735
DNA repair and recombination proteins [BR:
amt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Amet_2735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
RH_dom
zf-LITAF-like
DUF1284
Motif
Other DBs
NCBI-ProteinID:
ABR48886
UniProt:
A6TRR8
LinkDB
All DBs
Position
complement(2750382..2752466)
Genome browser
AA seq
694 aa
AA seq
DB search
MAKSLVIVESPAKAKTIEKFLGKRNYIVKASVGHVIDLPKSKLGVDIDKDYEPQYITIRG
KGPVLKEIRTEAKKAKRIYLATDPDREGEAISWHLANALNIDKNEACRIEFNEITKNAIK
SAIKTPRKINHDLVDAQQARRVLDRLVGYKISPLLWQKIRRGLSAGRVQSVATKMIKDRE
VEINAFQPEEYWSLILQVQNMQKEKFEVKFQSDHLGNKDIKSEDEINIIINKIKDKQLMI
TEVKQGEKKRNPSLPFTTSTLQQEASNKLGYSTKKTMSLAQQLYEGIELGKEGSVGLVTY
IRTDSTRISEEASQHVAQYITEKIGEHYLQKSTIVKKGKKSVQDAHEAIRPTDVTRSPDV
MKPYLKKDQYKLYKLIWERFVASRMEPALFDTLSITLDVEGVTFKANGSRLRFEGFLKVY
SLASRSEDTDLPVLNKDELTSIVEIDPKQHFTQPPPRYTEASLVRAMEEQGIGRPSTYSP
TIATILSRGYVEREGRNLLPTELGILVTGILEDFFSQIIDVHFSAELENQLDEIEEGKKG
WKSLIEDFYPSFEEMLKVAEEHIEEIHLVEESDEICDQCDAPMVIKHGRYGKFLACSSYP
DCTFTKPIVHKIDVKCPKCEDGEIVERKSKKGRLFYGCSGFPSCRFVSWAKPINEKCPQC
NEILAHKKTKKSEKITCTNSECKYERLIEDENEK
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatccttagtaattgttgagtcaccagctaaagcaaaaaccattgaaaaattt
ttagggaaaagaaattatattgtgaaggcatcagttggtcatgtaattgatttgcctaaa
agtaagctaggtgttgacatagataaagactatgaacctcaatatattaccataagaggt
aagggacctgtattaaaagaaattagaacggaagcaaaaaaagcaaaaagaatttatctc
gcgactgaccctgacagagaaggtgaggcgatttcttggcacttggccaatgcattgaat
atagacaaaaatgaagcatgtagaatcgaatttaatgaaattacaaaaaatgccattaaa
agtgcaattaaaacgccaagaaagatcaatcatgatttagtagatgcacaacaggctcga
agggtattagatcgtttggtagggtacaaaatcagtcctcttctttggcaaaaaattaga
agaggactcagtgcaggacgtgttcaatccgtagcgactaaaatgattaaagacagagaa
gtagagattaatgcatttcaacctgaagaatattggtctttaattttacaggtccaaaac
atgcaaaaagaaaagtttgaagtaaagtttcaaagtgatcatttagggaataaggacatt
aagtcagaagatgaaataaacataataattaataaaattaaagacaagcaattaatgatt
acagaagtgaagcaaggagaaaagaaaagaaatcccagtctccctttcacaacaagtaca
ttacagcaagaggcatcgaataaattaggatattctactaaaaagaccatgtcactggca
caacaattatatgaaggaattgagctagggaaagagggctcagttggtttagtgacttac
attcgtactgattccactcggatttctgaagaagcatctcagcatgtagctcaatacata
acagaaaaaattggtgagcactatcttcaaaaaagtacaatcgttaagaaaggaaagaag
tcagttcaggatgcacatgaggccattagacctactgatgtaactcgatctcctgatgtg
atgaaaccttatcttaagaaagaccaatataagctctataagttaatatgggaacgattc
gttgccagtcgaatggaaccggcgctctttgatacattatcaattacattagatgtagaa
ggagtcacctttaaagcaaatgggtcaagattaagatttgaagggtttctgaaggtttat
tctcttgccagtcgttctgaggatactgatttgcctgtattaaacaaggatgagctgact
tcaatcgttgaaatcgatcctaaacagcactttacccagccaccaccgagatatacggaa
gcatctctagtaagagcaatggaagaacagggaattggtaggcctagtacatattctcct
acaattgccacaatcttatcaaggggatatgtagaacgagagggaaggaacttactacct
actgagctaggcattttggtgacggggattttagaggacttcttttcacaaattatagat
gtacatttcagtgcagaacttgagaatcagcttgatgaaatagaagagggaaaaaaaggt
tggaaatcattaattgaagatttttatccatcatttgaagagatgttaaaggttgcagaa
gaacatattgaagaaattcacttagttgaggaaagtgatgaaatatgtgaccaatgtgac
gccccgatggtaatcaagcatggccgctatggtaagttcctagcctgttctagttatcca
gactgtactttcacaaaaccaattgttcataaaatagatgtgaaatgtccaaagtgtgaa
gatggagagattgtagaaagaaaatctaaaaaaggaagacttttttatggatgtagtggt
tttccaagctgtcgatttgtatcttgggctaaaccaattaatgaaaaatgcccacaatgt
aatgaaatattggctcataaaaaaacaaaaaaaagtgaaaaaattacgtgtaccaacagc
gaatgtaaatacgaaagactcatagaggatgaaaatgaaaagtaa
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