Alkaliphilus metalliredigens: Amet_3106
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Entry
Amet_3106 CDS
T00551
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
amt
Alkaliphilus metalliredigens
Brite
KEGG Orthology (KO) [BR:
amt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amt03032
]
Amet_3106
03400 DNA repair and recombination proteins [BR:
amt03400
]
Amet_3106
Enzymes [BR:
amt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Amet_3106
DNA replication proteins [BR:
amt03032
]
Prokaryotic type
DNA Topoisomerases
Amet_3106
DNA repair and recombination proteins [BR:
amt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Amet_3106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
Motif
Other DBs
NCBI-ProteinID:
ABR49246
UniProt:
A6TSS8
LinkDB
All DBs
Position
complement(3144964..3147756)
Genome browser
AA seq
930 aa
AA seq
DB search
MDKSINEIEVQEIEDTLESNYMPYAMSVIVSRALPEIDGFKPSHRKLLYTMSQMGLLTKG
RSKSANIVGTTMKLNPHGDQAIYETMVKMTRGHQGLLHAYVDSKGNFGKVYSRDMREASA
RYTEAKLEKFTQEIFSNIDKNVVDFVDNYDSTTKEPTLLPTTFPNILVKYNKGIAVGMAE
HIPSFNLKEVCEATIAYLKDKEIDLLEYLKAPDFSTGGELIFNEVTMKQVYHTGRGTFKV
RGKYRYVKADNAIEIYEIPYTTSIEAIIESIIELVKKGKIKEITDIRDETDKNGLKITID
LKRGVNPDDLMVKFFKWTKLEDSFGCNFNILINGHPKVMGVKEILDHWIAFRLSCLKRQV
QFEIDKLEEKLNLLKGLEKIQLNIHEVVDVIQNTKKDKDVIANLMEQFDLNLAQAEYIAE
IKLRSLNQELILKKIKEISAIEKELKRLGMVLARESKQNEIIVNDLKRISEAYGIPRKTD
IINENEVEVLSEEILIENYNMKLFLTNEGYIKKISLASLRSSGDHKLKDNDYIVQEIDGT
NRGEVLLFSNKETVYKIKAYELEDSKASNLGQYLNNVLGLSSDEIILHIVCTEDYQGHML
FFFENGKGAKIPITSYETKTNRKQLANAYSGDSPLVYISSIEEDLEMMATSNLNKTLIFN
TEEMSPINSRNSKGVQVFKCKKGISLKKIKPMDEVSPDEMLNQKVLDENPRVKFFLTKGG
YIKKIPLTTLVEDEEQRLKKDDYIIQEVEGAEEGELLLFSNKQILYKTKARELEEDEDKV
ASIGQRIRSILALDADEDIIYITYTDNYKGHMLFFFENGKGAKIPLESYETKTNRKQLAN
AYNGESPLVYISNIQEDIELVATSNINKILIFNTAQINPKSSRDSKGVQILKSKEGSYLQ
EIKALDEFDYEDFQYYRGNIPAVGTFHKIS
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggacaagagtatcaatgaaatagaggttcaagaaatagaagataccttagaatctaat
tatatgccctatgcaatgagtgtgattgtatccagggcattgcctgaaatagatggattt
aaaccctcccacagaaagctattatacaccatgtctcagatgggtctattgacaaaggga
agaagtaaatctgctaacattgtggggacgactatgaaattaaatccccatggggatcaa
gcaatctatgagaccatggtaaaaatgacaagaggtcatcagggattgcttcatgcctac
gtggattcaaagggaaactttggaaaggtttattcaagagatatgagggaggcctccgca
agatataccgaagctaagctagaaaaatttacccaggaaatcttttcaaacatagataaa
aatgtggttgattttgtagataactatgacagtaccaccaaggaacccacactattaccc
accacattcccaaatattctcgttaaatataacaaagggattgctgtaggaatggcggag
catattccaagctttaatctaaaggaagtatgtgaagccaccattgcctatttaaaggac
aaggagattgatcttttagagtatctaaaggctcctgatttttccacaggtggggaattg
atatttaatgaagtcactatgaagcaagtttatcatacaggaagaggaacatttaaggtt
cggggaaagtaccgctatgttaaggcggataatgccattgaaatttatgaaatcccctat
accaccagtattgaggccatcattgaaagtattatagaactcgtgaaaaaaggtaaaatc
aaagaaataaccgacatacgagatgaaacagataagaacggattgaaaattaccattgac
ctaaaaagaggcgtcaaccctgatgatttaatggttaaatttttcaaatggactaaatta
gaggatagctttggatgtaactttaatattctcattaatggacatccaaaggtgatgggc
gtaaaggaaattttagatcattggattgctttcaggttgagttgtctaaaaaggcaagtt
caatttgaaatcgataaattagaagaaaaactgaatctacttaagggtcttgaaaaaatt
caactcaatatccatgaagtagtggacgtaatacaaaacaccaaaaaagataaggatgtt
attgctaatttaatggagcaatttgatcttaatctggcacaggcagaatatatcgcagaa
attaaactgcgctctctaaatcaagaactcattttaaaaaagattaaagagatttcagcc
attgaaaaggaattaaaaagattagggatggtcttagcaagggaaagtaagcaaaatgaa
attattgttaatgacttaaaaagaatcagtgaagcctacggaatccctcgtaaaactgat
attattaatgaaaatgaagtagaggtattgtcggaagaaattttgattgagaattataat
atgaaattatttttaacaaatgaagggtatatcaaaaaaatctcattagcttccctaaga
agcagtggagaccataaattaaaggacaatgattatattgttcaagaaattgacggaacc
aatagaggagaagtactacttttctcaaataaggaaacggtgtataaaataaaggcctac
gaattagaagatagcaaggccagtaatttaggacaatatttaaataatgtattgggatta
agtagtgacgagatcatcctccacattgtttgtaccgaagattaccaaggacatatgtta
ttcttctttgagaatggcaagggagcaaaaattcccattacaagctatgaaaccaagact
aacagaaaacaattggctaatgcctatagtggtgactcccctcttgtttatatcagttcg
atagaagaggatctagagatgatggccactagcaaccttaataagactttaatatttaat
acggaggaaatgagtccgattaattcacgaaattctaagggagtacaggtatttaaatgc
aaaaagggtatttcgcttaaaaagataaaacctatggatgaagtatctcccgatgaaatg
ctcaatcaaaaagtgctagatgaaaatcctagggttaaattcttcctaacaaagggagga
tatattaaaaaaattcctctgaccaccctagtggaagatgaggaacagaggttaaagaag
gatgattacattattcaagaagttgaaggtgctgaggagggtgaattactactcttttca
aacaagcaaatcctttacaaaacaaaggctagagagctagaagaggatgaagataaagtt
gccagtataggacaacgcataaggagtatactagccttagatgccgatgaagatatcata
tacattacctatacagataattataaaggccacatgctatttttctttgaaaatggtaaa
ggggcgaaaattcctcttgaaagttatgaaaccaaaaccaacagaaaacaattggcaaat
gcctataatggcgagtcgcctcttgtgtatataagtaacatacaagaggatatagaatta
gtggccactagtaacattaataagattttaatttttaacactgcacagattaatcccaag
agttctcgtgattctaagggtgtgcagatattaaaatctaaggagggtagttacctccaa
gaaataaaggctcttgatgaatttgattacgaggattttcagtactatagagggaatatc
ccagctgttggaacatttcataaaataagttga
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