Alkaliphilus metalliredigens: Amet_3405
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Entry
Amet_3405 CDS
T00551
Name
(GenBank) Collagen triple helix repeat
Organism
amt
Alkaliphilus metalliredigens
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
BclA_C
Motif
Other DBs
NCBI-ProteinID:
ABR49533
UniProt:
A6TTL5
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All DBs
Position
3471728..3473185
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AA seq
485 aa
AA seq
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MYMSSSRSRQFYSHKLGVLPSPDTEQQAHHTGYTPKPCPPKPCPPCPPGPPGPPGPTGPQ
GPQGIPGAVGPQGPIGPIGPEGPQGPQGIPGAVGPQGPIGPQGPQGIPGATGPQGPQGVP
GPIGSQGPIGPQGPIGAQGPIGPQGPQGVPGATGPQGPVGATGPQGPQGVPGTTGPQGPA
GPQGPQGVPGTTGPQGPVGPQGIPGATGPEGPTGPQGPIGPVGPTGATGATGPIGPIGPI
GPIGPIGPVGPTGPIGPIGPIGPTGPIGPVGPTGPIGPIGPTGPIGPVGPTGPIGPIGPI
GPIGPIGPTGPTGPIGPLGPIGPLGPTGPQGPIGPTGPVGPIGPTGPQGLSAYAYIYNVV
AQTVPVEADVTFSNNGVVSGNITHVPGTAAIILGTAGDYSVWFYASTLEPSQFTLFQNGL
PVPGATYGVEAGTSPNPGWVIISASAGDVLTVRNHTSEVPVILETFAGGTQVTTNASILI
QKIDS
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgtatatgagtagtagtcgatcacgtcaattctattcacataaattaggtgtattaccc
tctccagacacagaacagcaggcacatcatacaggatatacacctaaaccttgtccacct
aaaccttgtccgccttgtcctccagggcctccaggacctccaggacctactgggcctcaa
ggacctcaaggtatccctggtgcagttggaccccaagggcccattggacctattggacct
gaaggaccccaaggacctcagggtatccctggtgctgtcggacctcaagggcctattgga
cctcaaggaccgcaaggtatccctggtgctactgggcctcaaggacctcaaggtgttcct
ggaccaattggatctcagggaccaatagggccacaaggaccgatcggtgcacaagggcct
attggacctcaaggacctcaaggtgttcctggtgccactggacctcaaggacctgttggc
gctactggacctcaaggacctcaaggtgttcctggtaccactggaccacaaggacctgct
ggaccgcaaggacctcaaggtgttcctggtactactggacctcaaggacctgttggacct
caaggtatacccggtgccactggacccgaaggacctactggacctcaagggcctattgga
cctgttggacctactggggccactggggctactggacctatcggacctatcggacctatc
ggacctatcggacctatcggacctgttggacctactggacctatcggacctatcggacct
attggacctactggacctatcggacctgttggacctactggacctatcggacctatcgga
cctactggacctatcggacctgttggacctactggacctatcggacctatcggacctatc
ggacctatcggacctatcggacctactgggcctactgggcctatcggacctcttggacct
atcggacctcttggacctactggacctcaagggcctattggacctactggacctgttgga
cctatcggacctactggacctcaaggactatctgcatatgcctatatctataatgtagtc
gctcaaacagttccagtagaagcagatgtcacatttagtaataatggtgtggtaagcgga
aatattacccatgtaccaggaactgctgcaattattcttggtactgctggtgattattca
gtatggttctatgcttcaaccttagaaccaagtcaatttacactattccaaaatggcctt
cctgttcctggcgccacctatggtgttgaagctggcacatcccctaacccgggttgggtc
atcattagtgcttccgctggtgacgtgttaacagttcgaaatcacaccagtgaagtccct
gttattttagaaacatttgcagggggcacacaggtcactaccaatgcatctatcctcatt
caaaagatagatagttag
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