Alkaliphilus metalliredigens: Amet_3847
Help
Entry
Amet_3847 CDS
T00551
Name
(GenBank) ABC transporter related
KO
K03701
excinuclease ABC subunit A
Organism
amt
Alkaliphilus metalliredigens
Pathway
amt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
amt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Amet_3847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amt03400
]
Amet_3847
DNA repair and recombination proteins [BR:
amt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Amet_3847
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Amet_3847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
SMC_N
AAA_21
AAA_29
nSTAND1
AAA_15
RsgA_GTPase
AAA_16
nSTAND3
AAA_33
Viral_helicase1
SLFN-g3_helicase
ComA
DnaJ_CXXCXGXG
Sigma54_activat
APS_kinase
ATPase
Porin_8
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ABR49964
UniProt:
A6TUU6
LinkDB
All DBs
Position
complement(3960617..3963145)
Genome browser
AA seq
842 aa
AA seq
DB search
MTSNEENDVFCAELETNLDIKDEYDNQEIHVHNARIHNLKNVSVSILKNSIILITGVSGS
GKSSLAFDTIFTESQKQFMDLVLSNQMLNNTFSDVYVDKITGLQPSIAIEQRNLGVNPRS
TVGSVTKIADVFKLLFATIGKRVCPWCHQVVDDSNVCKDCGAILFDRTPQVFSYNHPDYM
CPLCKGLGVEMRIDEEKIVEHPEKSLLDGASSLYGDLRKHRKKPNANWMRGEILALADDM
NVDLELPFYRLPKEFKQQFFYGSNGREVSLAYENSKGRSGVIRRPVEGAINLIQRLAHDT
KATRSTDQVHQFMSKKTCSCCQGERLLEEGRLVNIQGYRYPEVVSLSIDKLRKWCHRIYE
QLIKEQQDKTRMIFIKLNQRLKKIQSVGLGYITLNRSVPSLSGGEAQRLKLATQFGTGLS
NILYIMDEPSKGLHPKDYRFLMDAIVDLKKYGNTVILVEHKKSFLTIADMHLHMGPKAGR
YGGELVFVHHRKEIENQLISQDCSDDFDTIKVIDSVSLDNNKAIKDTYIQLKGVTTNNLK
NIDVAIPIGMMTAVIGVSGSGKSTLISKTLYPYIMSSLGRTVEEKGTFQKVIGIESFEDV
CYVNQKAIGSNSRSNPGTYTGVFDLIRQCYADTQQAKKKNLSKEYFSFNSKKGQCPECSG
LGEVAVNMHYMDNLYVPCNKCHGKRYSKEVLKITRKDCSIGDILDIEIHDLLEVFQEEKE
IVRQLSMLNKVGLGYLKLGQSASTLSGGEAQRIKLAKELNKNECKNILYILDEPTTGLHE
EDVEKVIDVLKELKEKGATIIIIEHNLKMIKKCDYIVELGPGGVQGGHILQAGFQKREGD
FI
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaaatgaagaaaatgatgttttttgtgctgagcttgagacaaatcttgatata
aaagatgaatatgataatcaagagatacatgtacacaacgctcgtattcataatctaaaa
aatgtatccgtatctattttgaaaaacagcatcatcttaatcaccggggttagtggaagt
ggtaaatctagtttagcctttgatacgatttttactgagagtcaaaagcagtttatggat
ttggtactctcaaatcagatgttgaataatacgttttctgatgtatatgtcgataagata
acgggtttacagccatctatagccattgaacaacgaaatttgggggtaaatcccagatct
acagtaggatcagtaacaaagattgcagatgttttcaaacttttatttgccacaataggt
aagcgagtatgtccgtggtgccatcaagttgttgatgacagcaatgtttgtaaagactgt
ggtgctattttgtttgacagaacgccacaagtattcagttacaatcatcccgattatatg
tgtcccctttgtaaggggttaggagtggagatgcgtattgatgaggagaagattgttgag
catccggagaaatcgctattggacggtgcttcatcattatatggtgatttaagaaaacat
aggaagaaacctaatgcaaattggatgcgaggcgaaattttagccttagctgatgatatg
aatgtagatctggaattgcctttttaccgattacctaaggaatttaagcaacaattcttc
tatggttcaaatggacgtgaagttagtttggcttatgaaaattcaaagggaagaagcggg
gtgatcagaagacctgtagaaggagctataaatctcattcagaggctagctcatgatact
aaagctacaagaagtactgatcaagtacaccaatttatgtctaaaaagacctgcagttgt
tgccaaggagaacgtttacttgaagaaggtagattggtaaatattcaaggatatagatat
cctgaagttgtaagcttaagtatcgataagttacgtaaatggtgccataggatttatgag
caacttatcaaggaacagcaggataaaacaaggatgatttttataaagcttaatcaaaga
cttaaaaaaatacaaagtgtaggtttaggctatataacattaaatagaagtgtacctagc
ttatctggtggagaagcacagcgtttaaaattggcaactcagtttggtacagggctttct
aatattctttatatcatggatgagccttcaaaaggattacatcctaaggattaccgattt
ttgatggatgccattgtggatttaaagaagtatggtaacaccgttattttagtagaacat
aagaaaagctttttgaccattgccgacatgcatcttcatatggggccaaaagcagggaga
tatggtggagaactcgtttttgtacatcatcgaaaagagattgaaaatcagcttatatca
caagactgtagcgatgactttgacactatcaaagttattgacagtgtctccctggataac
aacaaagccataaaggacacctatattcaactaaaaggagttactaccaataacttgaaa
aatattgatgttgcaataccaatcgggatgatgacagcagttataggtgttagtggttct
ggaaaaagtactcttatttcaaagactctgtatccttacattatgagttcattgggaaga
acggttgaagagaaggggacttttcaaaaggtaatcggtatagaatcctttgaagatgtg
tgctatgtgaatcagaaagcaattggtagtaattctagatcgaatccgggaacttataca
ggtgtgtttgatttaataagacaatgctatgcagatactcagcaggcgaaaaagaagaat
ctgtcaaaagaatactttagctttaattctaaaaaagggcaatgcccggaatgcagtggt
cttggagaagtggcagtgaacatgcattatatggataatttatatgttccttgtaacaaa
tgccatgggaaaagatattctaaagaggtgttgaaaattacaagaaaagactgttccata
ggagatatccttgatattgaaattcatgatttgctagaagtttttcaggaggaaaaggaa
attgtcaggcagctttctatgcttaataaagttggtttaggttaccttaagcttggtcaa
agtgcttctactttatcaggcggtgaagcacaaagaataaagttggctaaagagttaaat
aaaaatgagtgtaaaaacatcctttacattttggatgaaccaaccactggtctccatgaa
gaagatgttgaaaaagtcatagatgttttaaaagaactgaaagaaaaaggtgctacaatc
attattatagaacataaccttaaaatgataaagaaatgtgattacattgttgaacttgga
cctggtggtgttcaaggggggcatatccttcaagcggggtttcaaaagcgtgaaggagac
ttcatatga
DBGET
integrated database retrieval system
