Alkaliphilus metalliredigens: Amet_4092
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Entry
Amet_4092 CDS
T00551
Name
(GenBank) uncharacterised P-loop ATPase protein UPF0042
KO
K06958
RNase adapter protein RapZ
Organism
amt
Alkaliphilus metalliredigens
Brite
KEGG Orthology (KO) [BR:
amt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amt03019
]
Amet_4092
Messenger RNA biogenesis [BR:
amt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Amet_4092
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
Init_tRNA_PT
SKI
AAA_24
Motif
Other DBs
NCBI-ProteinID:
ABR50173
UniProt:
A6TVF5
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All DBs
Position
complement(4185155..4186033)
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AA seq
292 aa
AA seq
DB search
MKFVIITGLSGAGKSQTVKSMEDFGFYCVDNLPPALIPKFAELCHQSQGVISRAALVIDI
RGGMFFDDLFESLKELEHLGHQYEILFLDADDEVLMKRFKETRRSHPLNVDGSIENGITR
ERELLQELKDRASHIIHTTKLIPAQLKEELRNIYVEGNQMNNLMISIASFGFKHGIPLDS
DLVFDVRFLPNPFYIEELKDFTGNDVKVRNYVMNSPISVEFSNKLHDIVSFLIPHYVQEG
KNQLVISIGCTGGRHRSVTIAHVLYHQLKDKGHRVTLSHRDSGETRERKKES
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgtcattattacaggattgtcaggggcgggaaagagccaaactgtcaaaagt
atggaggattttggtttttattgtgtggacaatttacccccggctttaataccaaaattt
gctgaactgtgtcatcaatcccaaggtgtgatcagtcgagctgcccttgtgattgacatt
cgtggggggatgttttttgatgacttatttgaaagcttaaaggagcttgaacatttaggg
catcaatatgaaattttgttcttagatgctgatgatgaagtattgatgaagcgattcaaa
gaaaccagaagaagtcacccattaaatgttgatggatccattgaaaatggtattactcga
gaaagagagttgcttcaagaattaaaagaccgcgctagccacattatccacacaacgaag
ctcataccagctcagttaaaggaagagttaagaaatatttatgtagaaggtaatcaaatg
aataacctaatgatctccattgcatcctttggctttaaacatggtatccctttggattct
gatttagtatttgatgtgcgttttttaccaaaccccttttatattgaagaactaaaggat
tttacaggaaatgatgtgaaagtaagaaattatgtcatgaattctccaataagtgtagaa
ttttccaataagctccatgacatagtgagctttttaattccacactatgttcaagaaggc
aaaaatcaattggtcatctccatagggtgtaccggtgggagacaccgctctgtcacaatt
gcccatgtactttatcatcagttaaaggataaaggacatcgggttaccttaagtcatcgc
gattctggagagactagagagaggaaaaaagagtcctaa
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