Alkaliphilus metalliredigens: Amet_4167
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Entry
Amet_4167 CDS
T00551
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
amt
Alkaliphilus metalliredigens
Brite
KEGG Orthology (KO) [BR:
amt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amt03400
]
Amet_4167
DNA repair and recombination proteins [BR:
amt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Amet_4167
Archaeal homologous recombinant proteins
Amet_4167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_21
SMC_N
AAA_27
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ABR50248
UniProt:
A6TVN0
LinkDB
All DBs
Position
complement(4263432..4266956)
Genome browser
AA seq
1174 aa
AA seq
DB search
MRPSLLKIKGINSFNGEQVIEFNRLVEKGLFGIFGPTGSGKSSILDAITLVLYGNISRDS
KEFINTEVDRGEVSFEFEILDGKRRRTYRLERGIKRKKNGGIETTVARMMELEVDGIKIL
AEGVTNVNQEVMRVIGLSADDFTRSVVLPQGKFSEFLKLTGRERRNMLERIFGLEQYGKT
IMDKISTQRKKYDVKRIDLEGQLKGYEGITGDYYKEVAEHLNLLLGEEQLLKVEILKLDK
EYQQGKKTWELQEERRGYEAIKKTLEEKKSEIEENRNQFEMGRKSNLLKPYLTNLKTIEE
KINENKINLEKLETDLPRVNEKLKEVQENHQKSLVYKEEQFPSLIAKVESCKQAEEMEEQ
NQLLIKEIKALEELYAYHYKESQEKAKGLEKLKVKRIEGKEKITEIEKYLEAIYIESHIR
EGLEQGYSLEKDMERVLLEKKENETMLVALSKVIEENKIKLKEKTQIKEGLEAGLSTFVE
AQKHLEQSPLKEENIVFTNKMELEKRKQQLITLRDHTTQRSTLVKVLEALLRDKTQLENN
KEAYITKIREAESGFETLKVEVKKIEMESVAANLAQHLHQGDSCPVCGSKEHPHPAEGKA
EALLIEKNNELGKSETKLLELKEEKTKIDISLAQVDKEGDMKKTSLEEIEKLVGNQSLED
FRKEVDGLEIELIKVIKEREAYTNNKTKTEAEIEKHKEGINSNNTLLTKLNIEIQKDSES
HETLINKIQKLRKNSNEISSSIEKLKEGLKIENIVVEYNQMKGLDKERWKKEKELKDLRE
IVEIENHQREALEEGLHSLNLEIAKNKQQLDGNKQHLNMSIEKIKKLVEDNNPKTYRVTL
ENRMKEVEETEKNLKVRVEKGSALQQKMVEEKAIAENNRVNLESEYSLKKQELEKMTQDQ
GFNSLEEIEKYVIIEEELERLEKQIITYDDDVKNINHNIGRINKALEGNCLTQEMWEQIQ
ALLTEKKQVQEKMSKEIGESQQIVKDVKVKLENIKELKKKEKKITHKLDILLELSKMLEG
NKFVEYVAINQLKYIAREASKWLKEITRGRYALELDSSGNFVMRDDFNGGIRRATNTLSG
GETFLTSLALALALSSHIQLKGSVPLEFFFLDEGFGTLDSELLEIVMNALERLHSEKLSV
GIISHVEELKNRVPIKLMVSPPIYGGEGTTIKII
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgagacctagtctattaaagataaagggaatcaatagctttaatggtgagcaggtgatt
gaatttaatcgactagtagaaaaaggactctttggaatcttcggacctacgggtagtgga
aaatcttcgatactagatgccatcaccttagtcctatatggaaacatttcaagggattct
aaggaatttattaatacggaagtggatcgaggagaagttagctttgaatttgaaatccta
gatggaaagagacgcaggacctatcgtttggaacgtgggattaagcgcaaaaaaaatgga
ggaatagaaaccacagtagccaggatgatggagctagaggtcgatggaatcaaaatattg
gcagaaggggtcactaatgtaaatcaggaagtcatgagagtgataggactgagcgccgat
gactttacacgttctgttgtgctaccccaggggaaatttagtgagtttttaaagctcaca
gggagagaaagacgaaatatgctagagcgtatttttggactagagcaatatggcaaaacc
ataatggataagatttctacccaacgaaaaaaatatgatgtaaagcgaatcgatttagaa
ggccaactgaagggttatgaagggattacaggggattattataaagaagtagcagaacat
ctaaatttattactaggggaagaacagctactgaaggttgaaattctaaagctagataag
gagtaccaacagggtaaaaaaacctgggagctacaagaggaacgacggggttatgaagcg
attaaaaaaacgttagaagaaaaaaagtcggaaatagaagaaaatcgaaatcaatttgaa
atggggaggaagtctaacctccttaaaccgtacctgacaaatttaaaaaccatagaagaa
aaaatcaatgaaaataagattaatttagaaaaactagaaacagatttgccacgggtaaat
gaaaaactaaaggaagtccaagaaaaccaccaaaaatccctagtctataaagaagaacaa
ttccctagtttaattgctaaagtagaaagctgtaagcaggctgaagagatggaggagcaa
aaccaactgcttataaaagaaataaaggctcttgaagaattgtatgcctatcattacaag
gagagccaagaaaaagctaagggattagaaaaattaaaagtgaaaagaattgagggtaaa
gaaaaaataacagaaatagaaaagtatttagaggcaatttatattgagtcccacattcgt
gaaggcctagaacagggctatagtctagaaaaggatatggaaagagtattactagaaaaa
aaagaaaatgaaacaatgcttgtggctttatctaaagtgatagaagagaacaaaataaag
ctaaaggaaaaaacacagataaaagaagggctagaagcagggttaagtacatttgttgaa
gcccaaaaacatttagagcagagtccattaaaggaagaaaacattgtttttacaaataag
atggaactagaaaaaaggaaacagcagttaataaccctaagggatcacacgactcaaaga
tccactttagttaaagtactagaagccctattaagagataaaacacaattagaaaataat
aaagaggcatatattacaaaaatcagggaagcagaaagtgggtttgaaacattaaaagtg
gaagtgaaaaaaattgagatggaatccgtagctgctaatctggctcaacacctacaccaa
ggagattcatgccctgtatgtggttcaaaggaacatcctcatcccgcagaagggaaagcg
gaagcacttctgatagagaagaacaatgagctgggtaaaagtgagaccaagctacttgaa
ttaaaggaagaaaaaacaaagatagatatttcccttgcacaagtagataaagagggggat
atgaaaaaaacctccttagaggagattgaaaaattagtaggaaatcaatccttagaagat
tttagaaaagaagttgatgggttagaaatagaattaataaaagtaataaaggaaagagaa
gcatatactaataacaaaaccaagacagaagcagaaatagaaaagcacaaggaaggaata
aatagcaacaataccctactgacaaagttaaatatagaaatacaaaaagacagtgaaagc
catgagacactaattaataaaattcagaagctacgcaaaaatagtaatgagatctcttca
tcaattgaaaaattaaaggaaggtcttaaaattgaaaatattgttgtcgaatataatcaa
atgaagggtctggataaagaacggtggaaaaaagaaaaagaattaaaggatttgagggaa
attgtagaaatagaaaatcatcaaagagaagcattagaagaagggctacattccttaaat
ttagaaatagcaaaaaataaacaacagttagatggaaacaaacagcacctgaacatgtcc
attgaaaaaataaagaagcttgttgaagataataatcctaaaacctatagagtaacccta
gaaaacagaatgaaagaagtagaagaaacagaaaagaaccttaaggtaagggttgaaaag
ggtagtgccttgcaacagaagatggtagaagaaaaggccatagcagaaaacaacagagtt
aatttagagagtgagtacagtctaaaaaaacaagagctagaaaaaatgactcaagatcaa
gggttcaattctctagaagagatagaaaaatatgtgatcatagaagaagagctcgagaga
ttagaaaaacagattattacctatgatgatgatgtaaaaaatatcaatcataatataggt
agaattaataaggcattagaggggaattgtttaacacaggaaatgtgggaacaaattcag
gcattgttgactgagaaaaagcaagttcaagagaaaatgtctaaggaaattggagaatca
caacagattgtcaaggatgttaaagtaaagctagagaatataaaggagcttaaaaaaaag
gagaagaaaatcacccacaaactagatattctcttggaattaagcaaaatgttagaggga
aacaaatttgtagagtatgttgcaattaaccagttaaagtacattgccagagaagcctca
aaatggctaaaggaaattacaagggggaggtatgccctggaactagacagtagtggtaat
tttgtcatgagagatgactttaatggagggatcagaagagccacaaacacattatctggt
ggagaaacatttttaacctccttagcccttgccctagcattatcctctcatattcaattg
aagggaagtgtaccattggaattcttcttcctagatgaaggatttggtacattagacagc
gaactccttgaaattgtcatgaatgccctagagagattgcactcagaaaaattaagtgtg
gggattatcagtcatgtggaagagctgaaaaacagagtgccaattaagctcatggtgtca
cccccaatatatggtggggaaggcacaaccataaagattatataa
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