Alkaliphilus metalliredigens: Amet_4168
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Entry
Amet_4168 CDS
T00551
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
amt
Alkaliphilus metalliredigens
Brite
KEGG Orthology (KO) [BR:
amt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amt03400
]
Amet_4168
DNA repair and recombination proteins [BR:
amt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Amet_4168
Archaeal homologous recombinant proteins
Amet_4168
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
Motif
Other DBs
NCBI-ProteinID:
ABR50249
UniProt:
A6TVN1
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All DBs
Position
complement(4266946..4268166)
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AA seq
406 aa
AA seq
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MKILHTSDWHLGKTLEGNSRLAEQERFLEELVTIVNEKEIDLILVAGDIYDTSNPPAQAE
RLFYDSVKKLSANGQRPIIIVAGNHDNPDRLVAASPLAYEHGVVLLGKPKSIVEIGKYGT
FEIVDSGEGFLEIDLKGERVVILTLPYPSEQRLNELLSEELAEDARRKSYSARIGEIFSN
LSEKHREDTINLAISHLFVMGGEEVGSERPIQLGGSLTVDANHLPQRAHYVALGHLHKPQ
KVVGSGKIKAYYSGSPIEYSKKEVHYSKSVYVVEVNLGLDTKVEEVYLKNYKPIEVWKCK
GIKEALIRCEEDGERDIWVYLEIQTDRVMTQSEIKEMKKLRPHIVEIKPVFQEMDREEEE
LEDMTTMRIEDLFKDYYIYKNGVHPTEELMDLFSEIAQGEGDEDET
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaagatattacacacatctgactggcatttgggtaagactctagaggggaatagtcgt
ctggcagaacaggaacgatttttagaggagctcgttaccattgtaaatgaaaaagaaatc
gatttgattttagttgctggagatatatacgataccagtaatccaccagcccaggcagaa
agacttttttatgacagtgttaaaaagctttctgcaaatggacaacggcccattattatt
gttgctgggaaccatgataatcctgataggcttgtggctgcaagtccgctagcctacgag
catggggttgtattacttggaaagcccaaaagtattgttgaaataggaaagtatgggaca
tttgaaattgtagattctggagaagggtttttagaaatagatcttaagggagaacgggtc
gtgattttgacacttccttaccccagtgaacaaaggcttaatgagctgctttccgaggaa
ttagcggaggatgctagacggaaatcttattcagcccgaattggagaaatttttagcaac
ttgtctgaaaaacatagggaggataccattaatttagccatatcgcacctctttgtcatg
gggggagaggaggttggatctgagagacccatccagctggggggctcattaacggtggat
gccaatcatttgccccaaagggctcattatgtggcccttggacatcttcataaaccacaa
aaggttgtgggtagcggtaagataaaagcatattactctgggtctcccatcgaatatagt
aaaaaagaggtacattatagcaaaagtgtttacgtagtagaagttaacctgggccttgat
accaaggtagaagaagtttatttgaaaaattataaaccaatagaggtttggaaatgtaag
ggaatcaaagaagctctgatacgatgtgaagaggatggagaacgagatatttgggtttac
ttagaaattcagacggatagagtgatgacccaatctgaaattaaggaaatgaagaaatta
cgtcctcatattgtggagattaaacctgtatttcaggagatggatagggaagaagaggaa
cttgaggatatgacaaccatgaggattgaagacttgtttaaggactattacatatataaa
aatggtgttcatccaactgaagagttaatggatttatttagtgaaattgcccagggagaa
ggtgacgaagatgagacctag
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