Alkaliphilus metalliredigens: Amet_4255
Help
Entry
Amet_4255 CDS
T00551
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
amt
Alkaliphilus metalliredigens
Pathway
amt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
amt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Amet_4255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amt03400
]
Amet_4255
Enzymes [BR:
amt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Amet_4255
DNA repair and recombination proteins [BR:
amt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Amet_4255
Prokaryotic type
Amet_4255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ABR50333
UniProt:
A6TVW5
LinkDB
All DBs
Position
complement(4365074..4365757)
Genome browser
AA seq
227 aa
AA seq
DB search
MSVLHNDWAPIVEEEYEKTYYLKLKQFLMEEYRTKTVYPDEGDIFNALQLTPFGKVKAVI
LGQDPYHGPGQAHGLSFSVKPGVKTPPSLKNIFKELNGDLGYDIPEHGYLNQWAQEGVLM
LNTVLTVRRGEPNSHKGAGWEQFTDQIIKRLNERETAMVFILWGKNAQEKEALITNPQHH
IIKSPHPSPFSAHRGFFGSHPFSKTNDFLRGVGIEEINWNIEKSSDL
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttttacataatgattgggcaccgattgtagaggaagaatatgaaaaaacatat
tatctgaaattgaaacagtttttaatggaagaatatagaacaaaaacagtttatccagat
gaaggcgatatttttaatgcactacagcttacgccctttgggaaggtgaaggcggttata
ttaggacaggatccctatcacggtccagggcaagcccatgggttgagtttttctgtgaag
ccaggcgtgaagacaccaccatcccttaagaatatattcaaagagttgaatggggatcta
ggatatgatattccggaacacggttatttaaaccaatgggcccaagagggtgtattgatg
cttaatactgttttaacagtgcgtaggggagaacctaactcccataaaggtgctggatgg
gagcaatttacagatcagattattaagcgacttaatgaaagagagacggctatggttttc
atcttatggggaaaaaatgcccaagagaaggaagcgctcattacaaatccccagcatcat
attattaaatcaccacaccccagtcctttttctgctcatcgaggtttctttggcagtcat
cccttttctaaaaccaatgattttttaaggggtgtaggaatagaagaaataaattggaac
atagaaaaaagttcggatttatga
DBGET
integrated database retrieval system
