Akkermansia muciniphila: Amuc_0043
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Entry
Amuc_0043 CDS
T00736
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
amu
Akkermansia muciniphila
Pathway
amu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Amuc_0043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amu03400
]
Amuc_0043
Enzymes [BR:
amu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Amuc_0043
DNA repair and recombination proteins [BR:
amu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Amuc_0043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
AAA_19
AAA_16
ATPase_2
AAA_30
AAA_7
PIF1
SLFN-g3_helicase
zf-CHY
Zn_ribbon_ISL3
TrwB_AAD_bind
T2SSE
Motif
Other DBs
NCBI-ProteinID:
ACD03890
UniProt:
B2ULA1
LinkDB
All DBs
Position
59317..61533
Genome browser
AA seq
738 aa
AA seq
DB search
MQAARILVDGQSDLVLDYGIPPEAGDVKPGCRVQVPLRNRTATGTVLTLSEPAPAWKDRL
KPILKLIDPEPLISPVMMNLASWAADYYSVALDQMIRCLLPETVRQENTAEKMRKMVYLE
KTPAREELDALYRKAPRQAQMLDYFSSAKQQSAPLAAFGAGALNVARSLEAKGFISLKEE
AVHRDPSTGEQFVPTQPMKLNSQQQKALEEITAMCAAERKKPVLLQGVTGSGKTEVYLQA
VSQIVKSGKSALIMVPEISLTPQTVQRFKSRFAELPSSVAVLHSLLSDGERFDEWHAIRS
GKARIVIGPRSAVFAPLQNLGLVIVDEEHDASYKQESSPRYHGRDLAVLRAHLENCAVLL
GSATPSLESIHNALIGKYSLVKLTERADGQQLPLIRILDMKTEGRNKSGPNVISERLRMS
IDRRLDKGEQVILLLNRRGFARSIQCPDCGHVVTCLHCSLPLTYHRTEDRLMCHLCGFKA
LPPRSCPECRSANILLQGYGTQKVEELLRRTFPAARITRVDADVARRKNAVRTILNQFRA
HKIDILLGTQMIAKGLDFPNVTLVGVLNADLGLHIPDPRAGERTFQLLTQVAGRAGRGDL
SGEVIIQTFTPQSPSLQYARHHDTDGFAAQELEMRRTFDLPPFTHIAVLTIRSQHESMAE
FATQTLAARLRGMLPPPATMTDPMPAPIPRAHGQFRFQITVKGPSARILSRTLRKLVQEA
GLGEDLTAVIDVDAMSFM
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcggcgcgcattctggttgacggacaaagcgatctggtactggattacggtatt
cctccggaagcgggagacgtcaagccgggctgccgcgtacaggtgcccctgcgcaacaga
acggctaccggaaccgtgcttacgctgtcagaaccggccccggcctggaaggacaggctc
aagcccattctgaaactgatcgatccggagcccctgatttccccggtgatgatgaatctg
gcctcatgggcggcggactattactccgtggctctggatcagatgatccggtgtctgctc
ccggaaaccgttcgtcaggaaaatacggcggaaaaaatgcgcaaaatggtgtatctggaa
aaaactccggcacgggaggaactggacgccctgtaccgcaaagcaccccggcaggcccaa
atgctggattatttctcatccgcgaaacaacagtccgcccccctggcggcattcggcgcc
ggagccctgaacgttgcccgcagcctggaagccaaaggcttcatctccctgaaagaagag
gccgtgcaccgggaccccagcaccggggagcaattcgtccccacccagcccatgaagctg
aacagccagcagcagaaagcgctggaagaaatcacggccatgtgcgcggcagagcgcaaa
aaaccggtcctgctgcaaggagttaccggttccggcaagacggaggtttacttacaggcc
gtttcccaaatagtaaaatccggaaaatccgccctgatcatggtgccggaaatttccctg
acgccccagacggttcagcgtttcaaatcccgtttcgcagaactgccttcctccgtggca
gtgctgcacagcctcctctcggacggggagcgctttgacgaatggcatgccatccgttcc
ggaaaagcccgcatcgtcatcggtccccgttccgccgtcttcgcccccctccaaaatctg
ggcctggtgattgtggatgaagaacacgacgcctcttacaaacaggaaagctccccccgc
taccacgggcgggatctggccgtgctgcgcgcccatctggaaaattgcgccgtgcttctt
ggctctgccactccctccctggaaagcatccataacgccctgattggaaaatattccctg
gtaaaactgacggaaagggcggacggccagcagctcccgctcattcgcatcctggacatg
aaaacggaaggaaggaacaaatccggtcccaacgttatctccgaacgcctcaggatgtcc
attgaccggcgtctcgacaagggggaacaggtcatcctgctgctcaacaggcgcggattc
gcacgctccatccaatgcccggactgcggccacgtagtcacgtgcctgcactgctccctg
cccctgacctaccaccgtacggaagaccgcctcatgtgccacctgtgcggattcaaagcc
ctcccgccccgttcctgcccggaatgccggtccgccaacatcctgctccaggggtacgga
acccagaaagtggaggaactcctgcgccgcaccttccctgcggcgcgcatcacgcgcgtg
gatgcggacgtggcccggcggaaaaacgccgtccggaccattctgaaccagtttcgcgcc
cataagatagatattctcctgggcacccaaatgatcgccaaaggtttggattttcccaac
gtgacgctggtaggcgtactgaacgcggacctggggctccacatcccggatccccgtgca
ggggaacgcactttccagctcctgacgcaggtagcgggccgcgccggccgcggcgatctt
tccggagaagtcattatccagacttttacgccccagtccccctccctgcaatacgcccgg
caccatgacacggacggctttgcagcccaggaactggaaatgcggcgtactttcgacctc
ccccccttcacccatatcgccgtcttgaccatacgttcccagcatgaaagcatggcggaa
ttcgccacgcaaaccctcgcggcccgcctgcgcggcatgctcccccctcccgccacgatg
accgaccccatgcctgcccccatcccccgtgcgcacggacagttcagattccagattacg
gtcaaggggccatccgcccgcatcctctcccgcactctccggaaactggtgcaggaagcc
ggcctgggggaagacttgacggctgtcattgatgtggatgccatgtcattcatgtaa
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