KEGG   Akkermansia muciniphila: Amuc_0043
Entry
Amuc_0043         CDS       T00736                                 
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
amu  Akkermansia muciniphila
Pathway
amu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:amu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Amuc_0043
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amu03400]
    Amuc_0043
Enzymes [BR:amu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Amuc_0043
DNA repair and recombination proteins [BR:amu03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Amuc_0043
SSDB
Motif
Pfam: PriA_3primeBD DEAD ResIII PriA_C Helicase_C Zn_ribbon_PriA AAA_19 AAA_16 ATPase_2 AAA_30 AAA_7 PIF1 SLFN-g3_helicase zf-CHY Zn_ribbon_ISL3 TrwB_AAD_bind T2SSE
Other DBs
NCBI-ProteinID: ACD03890
UniProt: B2ULA1
LinkDB
Position
59317..61533
AA seq 738 aa
MQAARILVDGQSDLVLDYGIPPEAGDVKPGCRVQVPLRNRTATGTVLTLSEPAPAWKDRL
KPILKLIDPEPLISPVMMNLASWAADYYSVALDQMIRCLLPETVRQENTAEKMRKMVYLE
KTPAREELDALYRKAPRQAQMLDYFSSAKQQSAPLAAFGAGALNVARSLEAKGFISLKEE
AVHRDPSTGEQFVPTQPMKLNSQQQKALEEITAMCAAERKKPVLLQGVTGSGKTEVYLQA
VSQIVKSGKSALIMVPEISLTPQTVQRFKSRFAELPSSVAVLHSLLSDGERFDEWHAIRS
GKARIVIGPRSAVFAPLQNLGLVIVDEEHDASYKQESSPRYHGRDLAVLRAHLENCAVLL
GSATPSLESIHNALIGKYSLVKLTERADGQQLPLIRILDMKTEGRNKSGPNVISERLRMS
IDRRLDKGEQVILLLNRRGFARSIQCPDCGHVVTCLHCSLPLTYHRTEDRLMCHLCGFKA
LPPRSCPECRSANILLQGYGTQKVEELLRRTFPAARITRVDADVARRKNAVRTILNQFRA
HKIDILLGTQMIAKGLDFPNVTLVGVLNADLGLHIPDPRAGERTFQLLTQVAGRAGRGDL
SGEVIIQTFTPQSPSLQYARHHDTDGFAAQELEMRRTFDLPPFTHIAVLTIRSQHESMAE
FATQTLAARLRGMLPPPATMTDPMPAPIPRAHGQFRFQITVKGPSARILSRTLRKLVQEA
GLGEDLTAVIDVDAMSFM
NT seq 2217 nt   +upstreamnt  +downstreamnt
atgcaggcggcgcgcattctggttgacggacaaagcgatctggtactggattacggtatt
cctccggaagcgggagacgtcaagccgggctgccgcgtacaggtgcccctgcgcaacaga
acggctaccggaaccgtgcttacgctgtcagaaccggccccggcctggaaggacaggctc
aagcccattctgaaactgatcgatccggagcccctgatttccccggtgatgatgaatctg
gcctcatgggcggcggactattactccgtggctctggatcagatgatccggtgtctgctc
ccggaaaccgttcgtcaggaaaatacggcggaaaaaatgcgcaaaatggtgtatctggaa
aaaactccggcacgggaggaactggacgccctgtaccgcaaagcaccccggcaggcccaa
atgctggattatttctcatccgcgaaacaacagtccgcccccctggcggcattcggcgcc
ggagccctgaacgttgcccgcagcctggaagccaaaggcttcatctccctgaaagaagag
gccgtgcaccgggaccccagcaccggggagcaattcgtccccacccagcccatgaagctg
aacagccagcagcagaaagcgctggaagaaatcacggccatgtgcgcggcagagcgcaaa
aaaccggtcctgctgcaaggagttaccggttccggcaagacggaggtttacttacaggcc
gtttcccaaatagtaaaatccggaaaatccgccctgatcatggtgccggaaatttccctg
acgccccagacggttcagcgtttcaaatcccgtttcgcagaactgccttcctccgtggca
gtgctgcacagcctcctctcggacggggagcgctttgacgaatggcatgccatccgttcc
ggaaaagcccgcatcgtcatcggtccccgttccgccgtcttcgcccccctccaaaatctg
ggcctggtgattgtggatgaagaacacgacgcctcttacaaacaggaaagctccccccgc
taccacgggcgggatctggccgtgctgcgcgcccatctggaaaattgcgccgtgcttctt
ggctctgccactccctccctggaaagcatccataacgccctgattggaaaatattccctg
gtaaaactgacggaaagggcggacggccagcagctcccgctcattcgcatcctggacatg
aaaacggaaggaaggaacaaatccggtcccaacgttatctccgaacgcctcaggatgtcc
attgaccggcgtctcgacaagggggaacaggtcatcctgctgctcaacaggcgcggattc
gcacgctccatccaatgcccggactgcggccacgtagtcacgtgcctgcactgctccctg
cccctgacctaccaccgtacggaagaccgcctcatgtgccacctgtgcggattcaaagcc
ctcccgccccgttcctgcccggaatgccggtccgccaacatcctgctccaggggtacgga
acccagaaagtggaggaactcctgcgccgcaccttccctgcggcgcgcatcacgcgcgtg
gatgcggacgtggcccggcggaaaaacgccgtccggaccattctgaaccagtttcgcgcc
cataagatagatattctcctgggcacccaaatgatcgccaaaggtttggattttcccaac
gtgacgctggtaggcgtactgaacgcggacctggggctccacatcccggatccccgtgca
ggggaacgcactttccagctcctgacgcaggtagcgggccgcgccggccgcggcgatctt
tccggagaagtcattatccagacttttacgccccagtccccctccctgcaatacgcccgg
caccatgacacggacggctttgcagcccaggaactggaaatgcggcgtactttcgacctc
ccccccttcacccatatcgccgtcttgaccatacgttcccagcatgaaagcatggcggaa
ttcgccacgcaaaccctcgcggcccgcctgcgcggcatgctcccccctcccgccacgatg
accgaccccatgcctgcccccatcccccgtgcgcacggacagttcagattccagattacg
gtcaaggggccatccgcccgcatcctctcccgcactctccggaaactggtgcaggaagcc
ggcctgggggaagacttgacggctgtcattgatgtggatgccatgtcattcatgtaa

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