Akkermansia muciniphila: Amuc_0374
Help
Entry
Amuc_0374 CDS
T00736
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
amu
Akkermansia muciniphila
Pathway
amu03030
DNA replication
amu03430
Mismatch repair
amu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Amuc_0374
03430 Mismatch repair
Amuc_0374
03440 Homologous recombination
Amuc_0374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amu03032
]
Amuc_0374
03400 DNA repair and recombination proteins [BR:
amu03400
]
Amuc_0374
Enzymes [BR:
amu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Amuc_0374
DNA replication proteins [BR:
amu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Amuc_0374
DNA repair and recombination proteins [BR:
amu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Amuc_0374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
MCM10_OB
DUF655
Motif
Other DBs
NCBI-ProteinID:
ACD04213
UniProt:
B2UNA1
LinkDB
All DBs
Position
complement(445857..449381)
Genome browser
AA seq
1174 aa
AA seq
DB search
MPGSFVHLHNHTEYSLLDGAVHIKDLIAECSRMGMPAVAVTDHGNLFGAIELVMETNSLN
KSVAAWNKEHPEGPQKQEVKPIFGCEVYLSPTPISVKKQLPGRRKYTHLLLLAENETGWQ
NLVKLVSRSHLEGFYYKPRVDMETLREFHEGLICCTACIAGPLNEWLLNDQPEKAEEALL
ALKDIFGDDNIFVELQDHGMEEQKKCLPELVRIARKTNTPIVATNDVHFLRKEDHDMHDV
LICIGTNEKLASPKRMRYSTEVYLKSPEEMREVFKDYPEAVENTLKIAERCNVAIKLDST
STEKYPEFGTPDGSSREEYLRKVCYKGLEERYGKERVAADKELRDRLDYELGIINQLKFP
SYFLITADFINWAKDHDIPVGPGRGSAAGSLVAYAMKITNIDPLRFGLIFERFLNPERVS
PPDIDIDFCQTRRPEVIDYVRQKYGERAVSHIITYGTMGAKSVLRDVARVMDMSYADGDR
ISKLIETGPKVTLQSSYKSNEELRELIASDEGYAELWGYATRLEGLIRNVGVHAAGVVIG
DRPLDEHVALTRDDLSDPHAAVVAQCDMSAIYEVGLLKMDFLGLKTLTVMHDAEQYARWR
VPEFKLDSVPLDDRETLDLLNRGDTMGVFQLESGGMVDTCRRYGIQKIEDIIDLLALYRP
GAMQFMDEMIEVKKGLRQVEYEHPLLEQVSGETYGVMIYQEQVQAAAKLLAGYTLGGADL
LRRAMGKKDPAKMAKEKAHFVEGCWKTNQIDEKTATAIFDKIEKFAGYGFNKSHSACYGH
ISYWTAYLKAHFPVEFLCGLMSNEANNDKIGVFIQEANRMGIEILPPDVNKSMLKFTPEK
MPSGKLAVRYGLAAIKNVGEGAMQILLEEREKNGEFSSMEDICNRLDSKSVNKKILESLI
RAGALDWTLEPRCVLFERVDLALSGASQVHKDKALGQGSLFDMTFEAPRVKDEPAVPEWS
KEQRMGDEKDLLGAYFCGHPLDSMRGVIDAEKYTRIGLIDTLEPHELKQKHQIAGMVRSV
TPKISKAGRKFAILTLEDFTGSIEVLLWSDVYEKAQEMEGGLEPGVFVSVRANIREDDRT
SSKSVAAQSIDPLGGKKRKSKSGDQGPLNIIVSPLRHTRKNLEQIRDILKRYPGRSKVNL
TIKDSLGHSQILELDERFRVNRCPELETELSMYN
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgcccggttccttcgtacaccttcacaatcacacggaatattcgttgttggacggcgca
gtccatatcaaggacctcattgctgagtgttcccgcatggggatgcccgccgttgctgtt
acggatcacggcaatctgttcggagccattgaactggtcatggagacaaacagcctcaat
aaatccgtggccgcctggaacaaggagcatccggaaggaccgcagaagcaggaggtaaag
cctatctttggttgcgaggtttacctttccccgacgcccatcagcgtgaaaaaacagctt
cccggccgccgcaaatacacacatctccttttgctggcggaaaatgaaaccgggtggcag
aatctggttaaactggtgtcccgttcccacttggaaggcttttattataaaccccgcgtg
gatatggaaaccctgagggaatttcatgagggcctcatctgttgtacagcatgcattgcc
ggaccgcttaatgagtggctgctcaatgaccagcctgaaaaagcagaggaagcccttctg
gcgctaaaggatatttttggggacgacaatatttttgtagagcttcaggaccatggcatg
gaggaacagaaaaaatgcctgccggagctggtgcgtatcgcccgcaagaccaataccccc
attgttgccaccaatgacgtgcacttcctcaggaaggaagatcacgacatgcacgatgtt
ctgatttgcatcggaaccaacgaaaaactggcttccccaaaacgcatgcgctattccacg
gaagtgtatttgaaatctccagaggaaatgcgggaggtgttcaaggattatccggaggcc
gtggaaaatacgttgaaaattgcggaacggtgcaatgttgccatcaaactggattccacc
agtacagagaaataccccgaattcggcacgccggacgggtcgtcgcgcgaagaatacctg
cgtaaagtatgctataaggggctggaagaacggtacggaaaggaacgtgtagctgcagat
aaggaattgcgcgatcgtctggattatgaacttggaattatcaaccagttgaaatttccc
tcctatttcctgattacggcggatttcatcaactgggccaaggatcatgacattcccgta
ggtcccggtcgcggttctgcagccggttccttggtggcttatgccatgaaaatcacgaac
atagatcctctgagattcggattaatctttgaacgtttcctaaatccggaacgcgtcagc
cctccggatattgatattgacttttgccagacacgccggccggaagtaattgattatgtt
cggcagaaatacggagagcgcgctgtttcccacattattacgtacggcaccatgggggcc
aagtccgtactcagggatgtagcccgtgtgatggatatgtcctatgcggacggggaccgt
atttccaaacttatcgaaaccggccccaaggtgactcttcagtccagctacaagagtaac
gaggagctgagggagttgattgcctctgatgaggggtatgcggaattgtgggggtacgcg
acccgcctggaaggcttgatccgcaacgtgggggtacatgcggcaggtgttgtgatcggt
gaccgtcccctggacgagcatgtggcccttacccgtgacgatctgtccgatcctcatgcc
gctgtcgtcgcccagtgcgacatgagcgcgatttatgaagtggggcttttgaagatggac
ttcctgggtttgaaaaccctgaccgtcatgcatgatgcggagcaatacgcccgctggcgc
gtgccggagttcaaactggattccgtccctctggatgaccgggaaaccctggacttgctg
aacaggggggatacgatgggggttttccaattggaatccggcggtatggtggacacttgc
cgccgttacgggattcagaaaattgaagacatcattgacttgctggctctttaccgaccg
ggagccatgcagtttatggatgaaatgattgaagtgaagaagggactgcgccaggtggag
tatgagcatcctttgctggaacaggtcagtggggaaacctacggcgtgatgatctaccag
gaacaggtgcaggcggcggccaagctgctggccggctatacgcttggcggggccgacctt
ctgcggcgcgccatgggcaagaaagacccggcgaagatggccaaggaaaaggcccacttt
gtggaaggatgctggaaaacaaaccagattgatgaaaaaacggctacagctatctttgac
aagattgaaaaattcgccgggtatggttttaataaatcccactccgcttgctacgggcat
atttcctactggacggcctatctcaaggcccacttccctgtggaattcctctgcgggctg
atgtctaatgaggcgaacaatgacaaaatcggagtgttcattcaggaagccaatcgcatg
ggtattgagatcctgcctcccgatgtgaataaatccatgctcaagttcactcctgagaaa
atgccctccggcaagctggccgtgcgttatgggctggcggccattaagaacgtgggagag
ggggctatgcagattcttctggaagaaagagagaagaatggggaattttccagtatggag
gacatttgtaacaggctggattccaaatctgtcaacaaaaagattctggaatccctgatt
cgtgcgggagcgctggactggacgctggagccgcgttgtgttctgttcgaacgtgtggac
ctggccctcagcggagcttcccaggtacataaggataaggctctggggcaggggtctctg
tttgacatgacctttgaagcgcccagggtgaaggatgaacctgccgttccagagtggtcc
aaggagcagcgtatgggagatgaaaaggatctgttgggcgcttatttttgcggccatccc
ctggactccatgcgcggtgtcattgatgcggaaaaatatacccgcataggactcattgac
acgctggaaccacacgaactcaagcagaagcaccagattgccggcatggttcgttccgtc
acccccaaaatcagcaaggccggtagaaaattcgccattctgacgttggaagattttacc
ggcagcatagaagtgttgttgtggtcggatgtttatgaaaaggctcaggaaatggaggga
ggcttggagccgggcgttttcgtctccgtgcgagccaacatccgggaggatgaccgtaca
tcctccaaaagcgtggctgcccagagcattgacccacttggaggcaaaaagcgcaaatcc
aaatccggggatcaggggcctctgaatatcattgtcagtcccctccgccacacgagaaaa
aatctggaacagatacgggatattctaaaaaggtatcccggtcgttccaaagtcaatctc
accatcaaggacagcctgggccatagccaaattctggaactggatgaacggtttcgcgtg
aatcgctgcccggagctggaaacagagctttccatgtacaactaa
DBGET
integrated database retrieval system
