Akkermansia muciniphila: Amuc_0573
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Entry
Amuc_0573 CDS
T00736
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
amu
Akkermansia muciniphila
Brite
KEGG Orthology (KO) [BR:
amu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amu03016
]
Amuc_0573
Enzymes [BR:
amu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Amuc_0573
Transfer RNA biogenesis [BR:
amu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Amuc_0573
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
DUF3281
Motif
Other DBs
NCBI-ProteinID:
ACD04410
UniProt:
B2UPD3
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All DBs
Position
670610..671668
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AA seq
352 aa
AA seq
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MISEKEELLEWRKRAAAQPAGRVVLDLEADSLHRYQEKICLIQYADETGSCLIDPLSIED
MGPFYNWLKETEVWMHGADYDMSLFQNAWETLPAMIWDTQTAARLLGFRQFGLAALVEHF
HGITLSKSSQKADWARRPLSPTMVTYALNDVNYMLDMADKLTAALRKKGRMGWFEEICRH
SMERARERHLAGHQDPWRIQGCGKLNRKGLAALREMWTWRDAEAKTWDKPAFMVCSNADL
IQWSVALQEQRTVAPPPRFHAHRRSRFMNALQKFYLLDEEDYPCRPRIQRRQHSDQFEDN
LARLCKLRDEKAEELGMEGSFLITRASLEAIAEDREKGVSTLLNWQKEALGF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgattagcgagaaagaggaattactggaatggcgcaaacgcgccgccgcacagcccgcg
ggacgggtagtcctggatctggaggcagacagcctgcaccgctatcaggaaaaaatctgc
ctgatccaatatgcggacgaaacgggttcctgcctgattgaccctctctctatcgaagat
atggggcctttctacaactggctgaaagaaacggaagtctggatgcacggagcggactac
gatatgagcctctttcaaaacgcctgggaaacgctgcccgccatgatctgggatacgcag
acggcggcgcgcctgctgggcttccgccagttcgggctggcagccctggtggaacacttc
cacggcatcaccctgagcaaatcttcccaaaaggcggactgggcgcggcgccccctttcc
ccaaccatggtcacttacgccctgaacgacgtaaattacatgctggacatggcggacaaa
ctgacggccgccctccggaaaaaaggacgcatgggctggtttgaagaaatttgcagacat
tccatggaacgcgcccgggaacgccatctggcaggccatcaggacccctggcgcatccag
ggctgcggcaaattgaacaggaaggggctggccgccctccgggaaatgtggacctggcgt
gatgcggaagccaaaacgtgggacaaacccgcgttcatggtttgctccaatgctgacctc
atccagtggagcgtggctctccaggaacagcgcaccgtggcgcccccgccccgttttcat
gcccacaggcgcagccggttcatgaatgcgctccagaaattctacctgctggatgaagaa
gactacccatgccggccccgcattcagcgccggcaacattccgaccaatttgaggacaat
ctggcccgcctgtgcaaactcagggatgaaaaagctgaagaactgggcatggaaggctcc
ttcctgattacccgggcctctctggaagctattgcggaagacagggaaaaaggcgtttcc
accctgttgaactggcagaaggaagccctgggtttttaa
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