Akkermansia muciniphila: Amuc_0854
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Entry
Amuc_0854 CDS
T00736
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
amu
Akkermansia muciniphila
Brite
KEGG Orthology (KO) [BR:
amu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amu03032
]
Amuc_0854
03036 Chromosome and associated proteins [BR:
amu03036
]
Amuc_0854
03400 DNA repair and recombination proteins [BR:
amu03400
]
Amuc_0854
DNA replication proteins [BR:
amu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Amuc_0854
Chromosome and associated proteins [BR:
amu03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Amuc_0854
DNA repair and recombination proteins [BR:
amu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Amuc_0854
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_euk_2
DUF2267
TTC3_9th
Motif
Other DBs
NCBI-ProteinID:
ACD04687
UniProt:
B2UQF2
LinkDB
All DBs
Position
1017886..1018158
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTQFIRELQRELGNDVTSRQAEHALNAVLETIARAVRRRSLVKFRGFGTFRVKRRRAR
IVRHPENGGRLLVHESKTMKFRPSSLLWKE
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaacacaatttatccgggagctccagcgtgagctggggaatgacgttacttcc
cggcaggcggaacatgcgttgaacgcggtgctggagacgattgcgcgagcagtccggagg
cggtcgctggtgaaattccggggctttggcactttccgcgtcaagcggcgccgcgcccgc
atcgtacgccatccggaaaacggcggcaggctgctggtgcatgaatcgaaaaccatgaaa
ttccgcccctcttcccttctgtggaaggagtag
DBGET
integrated database retrieval system
