KEGG   Akkermansia muciniphila: Amuc_0957
Entry
Amuc_0957         CDS       T00736                                 
Name
(GenBank) NusA antitermination factor
  KO
K02600  transcription termination/antitermination protein NusA
Organism
amu  Akkermansia muciniphila
Brite
KEGG Orthology (KO) [BR:amu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:amu03021]
    Amuc_0957
   03009 Ribosome biogenesis [BR:amu03009]
    Amuc_0957
Transcription machinery [BR:amu03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     Amuc_0957
Ribosome biogenesis [BR:amu03009]
 Prokaryotic type
  rRNA transcription factors
   Amuc_0957
SSDB
Motif
Pfam: KH_5 NusA_N S1 MRP-S35 KH_NusA_C KH_KhpA-B PhyR_sigma-like
Other DBs
NCBI-ProteinID: ACD04789
UniProt: B2UQQ4
LinkDB
Position
complement(1142034..1143329)
AA seq 431 aa
MTNDIKALIDYYEREKGLSREKILLALESAFLSAYRKMVPGSGSINYLRAEINVDKGKVR
IFADLEVVPDEEYSDKFNQIPLSLAVKLDKNAVLHDLLPTNITPKGFGRIAVQTARQTML
QKLLDAEKEMLYDEFKDRAGDLVTGTIRRFEKGDIFVDLGKFEGVMTSRERVPNEDYSVG
DRMRFYVVEVRTEARGPEVILSRSHPNLVRRLFESEVVEIGDQTVEIHGIAREAGYRTKV
AVISHDDKVDPVGACVGMRGARVKNIVRELNNEKVDILEWTEDPVTFVREALSPVEPREI
TVDEEARKIFVIVQDDKDLSKAIGRRGQNARLTSRLMGWDVQVRVFDVQEAEKRQSQAAA
EEVMRQCQAAAKTLSEQLEIPEETAMGLVTMGGTDLVALTGFEASDIAESMGIPAEEAAQ
ILDKARDLISQ
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgacaaacgatattaaagctttgattgactactacgagagggaaaaagggctctcccgt
gaaaaaattctcctcgctctggagtccgcctttctctccgcctaccgcaaaatggttccc
ggttccggcagcatcaactacctgagggccgaaatcaacgtggacaagggcaaggtgcgt
atttttgcggacctggaagtggtgccggatgaagaatattccgacaaattcaaccagatc
cccctttccctggccgtcaagctggacaaaaacgccgtgcttcacgacctgctccccacc
aacatcacgcccaagggcttcggccgcatcgcggtgcagaccgcccgccagaccatgctc
cagaaactgctggatgcggaaaaggaaatgctctacgacgaattcaaggaccgcgccgga
gatctggtaacgggcaccatccgccgttttgaaaagggggatatttttgtggacctcggc
aaattcgaaggcgtcatgacctcccgcgaacgcgtgccgaatgaagactacagcgtcggc
gaccgcatgcgcttctacgtggtggaagtgcgcacggaagcacgcggcccggaagtcatc
ctttcccgcagccatccgaacctggtgcgccgcctctttgaatcggaagtggtggaaata
ggcgaccagaccgtggaaatccacggcatcgcccgcgaagccggctaccgcaccaaagtg
gccgtcatcagccatgacgacaaagtagatccggtaggggcatgcgtaggcatgcgcggc
gcccgcgtcaaaaacatcgtccgggagctcaacaatgaaaaagtggacatcctggaatgg
acggaagaccccgtcaccttcgtccgggaagctctcagccccgtggaaccgcgggaaatc
accgtggacgaggaagccagaaaaatcttcgttatcgtccaggacgacaaagacctctcc
aaggccatcggccgcaggggccagaatgcccgcctcacctcccgcctgatgggctgggat
gtccaggtgcgcgtctttgatgtccaggaagcggaaaaacgccagagccaggctgcggcc
gaagaagtcatgcgccaatgccaggctgcggccaaaaccctcagcgaacaattggaaatc
ccggaagaaaccgccatgggcctggtgaccatgggcggaacggacctggtggccctcacc
ggatttgaagcttccgacatcgcggaaagcatgggcattcccgcagaggaagccgcccaa
attctggacaaggcccgggaccttatctcccaataa

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