Akkermansia muciniphila: Amuc_0971
Help
Entry
Amuc_0971 CDS
T00736
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
amu
Akkermansia muciniphila
Pathway
amu03420
Nucleotide excision repair
amu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Amuc_0971
03430 Mismatch repair
Amuc_0971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amu03400
]
Amuc_0971
Enzymes [BR:
amu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Amuc_0971
DNA repair and recombination proteins [BR:
amu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Amuc_0971
MMR (mismatch excision repair)
Other MMR factors
Amuc_0971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_11
Viral_helicase1
AAA_16
FA_synthesis
Motif
Other DBs
NCBI-ProteinID:
ACD04803
UniProt:
B2UQR8
LinkDB
All DBs
Position
complement(1160384..1162390)
Genome browser
AA seq
668 aa
AA seq
DB search
MAKSFSMESLNAAQRKAVQTLQGPVLILAGAGTGKTRTVTCRIAHMVDRGISPKSILAVT
FTNKAALEMRERVGQMVERKAARQIMVSTFHSLCVRILREDIGRLGYKTNFTIYSGSEQS
GLIRRLIVRHGGITEKITPKDVLSSMSRMKNSGLGLDSIEDNLTANIAASYQRELQAQNS
VDFDDLLILADKLLKEHRDVREAWQQRFRYITVDEFQDTNSLQMSLLGHLVGPEHNVCVV
GDDDQSIYGWRGAQISNILEFERFFPNPSVIKLEENYRCTAPILDTANALIRHNLGRRDK
TLRAHKGGGEAVRLISMPGDAEEAEFIITDIENVRRQEGRPWEDFAILFRANTQSRIIEQ
TLREHKIPYRMVGAQSFFDRKEVKDLISYLATIENPQADEYLLRILNTPPRGISELTSHL
VIDWSREHGNSVWAALQDEEFLAALSTRARNSVQAFNELIAKYIDLFQDKETDFGDILEQ
LIEETGFSEYVTRLCKTEAEIQKRLVSIGDVKASLRNFWQPGKTLRDYLAQVTLDKEDND
DDVENKPGVCLITMHAAKGLEFPVVYLVGLEEGILPHKRSLEDGNCDEERRLLYVGITRA
QEKLMLTYCATRLRYGDRMPCQRSSFLSEIPPHLMEYYKWEDLMNAEATEEESGNFFDSL
RSMLLEEE
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggccaagtccttttccatggagagcctgaacgcggcccagaggaaggccgtgcagacc
ctgcaggggcccgtgctgatcctggccggggccggaacgggtaaaacgcgcaccgtcacc
tgccgcatcgcccatatggtggaccgtggcatcagccccaaaagcatcctggccgtgacg
ttcaccaacaaggccgctctggaaatgcgggaacgcgtaggccagatggtggaacgcaag
gcggcgcgccaaataatggtgagcactttccattccctttgcgttcgtatcctgagagag
gatataggacgcctggggtacaaaaccaatttcaccatttacagcggttccgagcaaagc
ggcctgatccggcgactgattgtgcgccacggcggcattacggagaaaatcacgcccaaa
gatgtgctttcttccatgagccggatgaaaaacagcggtctgggccttgactccattgaa
gacaacctgacagccaacatcgccgcctcctaccagcgggaacttcaggcgcagaattcc
gtggactttgacgacctgctgattctggcggacaaattgctgaaggagcaccgggacgtc
agggaggcgtggcaacagcgcttccgctatatcaccgtagatgaattccaggataccaac
agcctccaaatgagcctgctgggccatctggtaggtccggaacacaatgtctgcgtagtg
ggagacgacgaccagtccatctacggctggcgaggcgcccagatcagcaatatcctggaa
ttcgaacgttttttcccaaatccctccgtcatcaaactggaagaaaattaccgctgcacc
gcccccattctggacacggccaatgccctgatccgccacaatctgggccggagggacaag
acgctgcgcgcccacaaaggcggaggagaagccgtccggctcatttccatgcccggagac
gcggaagaggcggaattcatcattacggacattgaaaacgtccgcaggcaggaaggccgg
ccctgggaggatttcgccattctgttccgggccaatacccagagccgcatcattgaacaa
acgctccgggaacacaaaattccctaccgcatggtgggcgcgcaaagttttttcgaccgc
aaggaggtgaaagacctcatttcctatctggcgactatcgaaaacccgcaggctgacgaa
tacctgctgcgcatcctcaacacgccgccgcgcggcatcagcgagctgaccagccatctg
gtcatcgactggagccgggagcacggcaacagcgtctgggcagccctccaggacgaagaa
ttcctggcggccctttccacccgcgcccgcaacagcgtgcaggcattcaatgaactgatt
gcaaaatacattgaccttttccaggataaggaaaccgacttcggagacatcctggagcag
cttattgaggaaaccggattcagcgaatacgtcacgcgcctgtgcaaaacggaagctgaa
atccagaaacggctggtgtccatcggggacgtgaaagcctccctccgcaacttctggcaa
cccggaaaaaccctccgggactacctggcccaagtcaccctggacaaggaggataatgat
gacgacgtggaaaacaagccaggcgtatgcctgattaccatgcacgccgccaagggactg
gaatttccggtagtgtacctcgtggggctggaggaaggcattcttccccacaagcgttcc
ctggaagacggcaattgcgacgaagaacgccgcctgctttacgtaggcatcacgcgcgcc
caggagaaactcatgcttacttattgcgccacgcgcctgcgctacggggaccgcatgcct
tgccagcgctcctccttccttagtgaaattcctccccacctaatggaatattacaaatgg
gaggatctcatgaacgcggaagcgacggaagaggaatccggaaactttttcgattccctg
cgcagcatgcttctggaagaggaataa
DBGET
integrated database retrieval system
