Akkermansia muciniphila: Amuc_1116
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Entry
Amuc_1116 CDS
T00736
Name
(GenBank) phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
amu
Akkermansia muciniphila
Pathway
amu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
amu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Amuc_1116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amu03400
]
Amuc_1116
Enzymes [BR:
amu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Amuc_1116
DNA repair and recombination proteins [BR:
amu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Amuc_1116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
GSCFA
Motif
Other DBs
NCBI-ProteinID:
ACD04942
UniProt:
B2UR57
LinkDB
All DBs
Position
complement(1334351..1335268)
Genome browser
AA seq
305 aa
AA seq
DB search
MSATPNSLFRHYLDSLIQQGTTRTSLTDEARNVLRTWYVASRQGGRPAASAPASPEPPPL
QAAAPASAPASAPAGKPEPPELFPQNREPASAITLPEGTMEDKLQYLRNLAQNWKPAREL
NSLRDTMVFATGNPHTKLMLIGEAPGYYEEVQQEPFVGRAGEKLNQILRAMGLSRDMVYI
SNIVKFRPALPNQRTNNRAPTPEEIEACLPIIMHEIRVIQPKMIVALGGTAAVGLLGEQG
SVSSMRGRFHDLNGIPVRVTYHPSYLLRSDSPREKRKVWEDMLAVMERLDMPISEKQRGY
FLPRA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctacaccgaacagccttttccgccattatcttgattccctgatccagcaggga
acaacgcgaacgagcctgacggatgaagccagaaacgttctcagaacatggtacgtggct
tccaggcagggaggccgtcccgccgcatcagcacccgcttctccggaaccgccgcccctg
caggcagccgctcctgcctccgctcctgcctccgctcctgccggaaagccggaaccgccg
gagctgtttccgcaaaacagggaaccggcctctgccattaccctcccggaagggacaatg
gaagacaagctgcaatacctccgtaatctggcgcagaactggaaaccggcgcgggaactc
aactccctgcgggacaccatggtctttgccacgggcaatccccatacgaaactcatgctc
atcggggaagctcccggatattatgaagaagtgcagcaggagccctttgtgggccgtgcc
ggggaaaaactcaaccagatattaagggccatggggctctccagagacatggtctatatt
tccaatatcgtcaaattccgcccggccctccccaaccagcggaccaataaccgtgcaccc
acgccggaagaaattgaagcatgcctgcccatcatcatgcatgaaatccgggtcatccag
ccgaaaatgattgtagccttgggcggtaccgccgccgtaggcctattgggggaacaggga
tccgtcagttccatgcgcggcaggttccacgaccttaacggcattcccgtacgcgtcact
taccatcccagttatctgctcagatcggacagcccgcgggaaaaacgcaaggtatgggaa
gacatgctggccgttatggaacgcctggacatgcccatctcagaaaaacagcgcggctac
ttcctgcccagggcataa
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