Akkermansia muciniphila: Amuc_1228
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Entry
Amuc_1228 CDS
T00736
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
amu
Akkermansia muciniphila
Pathway
amu03030
DNA replication
amu03430
Mismatch repair
amu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Amuc_1228
03430 Mismatch repair
Amuc_1228
03440 Homologous recombination
Amuc_1228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amu03032
]
Amuc_1228
03400 DNA repair and recombination proteins [BR:
amu03400
]
Amuc_1228
Enzymes [BR:
amu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Amuc_1228
DNA replication proteins [BR:
amu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Amuc_1228
DNA repair and recombination proteins [BR:
amu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Amuc_1228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
AAA_22
AAA_5
RuvB_N
AAA_30
TIP49
AAA_7
AAA_16
AAA_2
ResIII
AAA_14
AAA_18
Mg_chelatase
AAA_19
DUF815
Motif
Other DBs
NCBI-ProteinID:
ACD05053
UniProt:
B2URG8
LinkDB
All DBs
Position
complement(1475565..1477763)
Genome browser
AA seq
732 aa
AA seq
DB search
MSYQVFARKYRPLTFDDVLGQDHVVRTLKNAIEHNRLAHAYLFVGPRGTGKTSTARIFAK
ALNCSGGPKVDFDPHEDICEEIAEGRSLDVLEIDGASNRGIDHIRDLRDNVRFAPSRGNF
RIVYIDEVHMLTKESFNALLKTLEEPPPHVKFIFATTEPHKILPTILSRCQRFDLRPIPS
EIIAEHLLHIASAEGVSLSREAAFAVAKVADGGMRDAQSMLDQLVSFCGDHIEEQQVLHI
FGITSRETVAHALALILNKELPSLLHLLHEQAEAGRDMSQFLSEIISAVREILVSKVDPE
ASFDSLPESSKEELAELVKRTHTDKILRLVEVLAETEDKMRWSTNKRLHLEMGLIKAVHT
LAEASISDIIMALEGAPLATAAPASSSDLASQQEPSTFISSATAPTPAPRQNIQSPVAAT
NPTPATEEHLMDPIPDFSLSSPASSPAVQKIQSTDAQASPHPTQEAEPQQETLTPAAPPT
SLAVAEEEFPYSATKLRTKTVPASEEITRHPDSDASDVSKFPTDSPEPTFMDPEENLPLE
RRTNSFFDNLFDTPSTSSQTQAPVEKEEPAVLSQQSGRTITEEDWKTVLEQMSAKFPLQA
DFLANSVFSGYDGVAVAISFHPSDRQGMDSLGTGPLRTALEAALSQYIGTSVTISIRQDF
SIPEPVQEELAPLPAPPPSASTIPAPKPHTPQKKTAEPVQEASKEENEDNSYYTDPLIDA
AMEIFRARIISQ
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
gtgagttaccaggtctttgccagaaaataccgtcctctgacattcgatgacgtccttgga
caggatcatgttgtccggacgttgaaaaacgccattgagcacaaccgtctcgcccatgcc
tatctctttgtaggtccccgtggaacgggaaagacatcaaccgcaagaatttttgcgaaa
gctctaaactgcagcggtgggcccaaagtggattttgacccgcatgaagatatatgtgaa
gaaattgcagaagggcggagcctggatgttcttgaaatagacggagcatccaaccgcggc
attgatcacatccgggatctcagggacaacgtacggttcgctccgagcagaggaaatttc
cgtatcgtctatatagatgaagtgcacatgctcactaaggaatccttcaacgccctgctc
aaaacgctggaagaaccgccacctcatgtcaaatttattttcgcaaccacggaaccccat
aaaatactgccaaccattctatcgcgatgccagcgcttcgacctgcgccccatcccttct
gaaatcattgcagaacacctgctccatatcgcttctgcagagggagtaagtttgagcagg
gaagcagcctttgctgtcgccaaagtggcggatggaggtatgcgggatgcacaatccatg
ctggaccagcttgtttccttctgtggagatcatattgaagaacagcaggtactccacatt
ttcggcattacttcccgggagaccgtggcccatgctctggcgcttattttgaacaaggaa
cttccctctctcctgcatcttctgcatgaacaggcggaagcaggaagagacatgagccag
ttcctttccgaaattatctccgccgtgcgtgaaatcctggtctctaaagtagatccagaa
gccagctttgattctctcccggaatcctccaaggaggaactcgccgaattggtcaaacgc
acccatacggacaaaatcctgcgtttggtggaagttctggcggaaacggaagataaaatg
cgctggtccaccaataaaaggcttcatctggaaatgggcctgattaaagccgttcatact
ctggctgaggccagcatcagcgatattatcatggcgttggaaggtgctccgctagccacc
gcggcaccggcctcttcttcagatcttgcttcacagcaggaaccaagtacatttatttcc
tccgccacggcacccactccggccccccggcaaaacatccagtctcctgttgctgcaaca
aacccaaccccagctacggaagaacatttgatggatccgattccagatttttctttgtct
tcccctgcttcatctcccgcagtacagaaaattcagagcactgacgctcaagcttctccc
catcctacgcaggaagccgaaccacaacaggaaactcttacacccgctgccccccccacc
tctcttgccgttgcagaggaagaatttccctactccgccactaaattgcggacaaaaacc
gtacctgcctccgaagaaatcacccggcatccagactccgatgcctccgatgtgtcgaaa
tttcctacggattctccagagcctacttttatggatccagaggaaaatcttcctctggaa
agacgaactaacagtttctttgacaatctattcgatactccaagcacatcatcccaaacc
caggcacccgtagaaaaagaggaaccggcagttctgtcccaacaatcaggaagaacaatc
acggaagaagactggaaaacggtgttggaacaaatgtccgccaaattccctcttcaagcg
gactttctagccaacagcgttttttccggttatgatggtgtagcagtcgccatttctttt
catccttctgaccgtcaggggatggacagtcttggaaccggccctctgcgaacagctttg
gaagctgctctttcccaatatattggaacctctgttactatttctatccgtcaggatttc
tccattcccgaacccgtgcaggaagaactggctcctctgcctgcaccacctccttccgca
tccaccattcctgcacctaaacctcataccccgcagaaaaaaaccgcagagcctgtccag
gaagcttccaaagaggaaaatgaagataactcttactacacggatccgctgattgatgct
gctatggagattttccgggctcgtatcatttcccaatag
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