Akkermansia muciniphila: Amuc_1286
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Entry
Amuc_1286 CDS
T00736
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
amu
Akkermansia muciniphila
Brite
KEGG Orthology (KO) [BR:
amu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amu03032
]
Amuc_1286
03400 DNA repair and recombination proteins [BR:
amu03400
]
Amuc_1286
Enzymes [BR:
amu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Amuc_1286
DNA replication proteins [BR:
amu03032
]
Prokaryotic type
DNA Topoisomerases
Amuc_1286
DNA repair and recombination proteins [BR:
amu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Amuc_1286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Foamy_virus_ENV
HTH_19
Motif
Other DBs
NCBI-ProteinID:
ACD05111
UniProt:
B2URM6
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Position
1557384..1560005
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AA seq
873 aa
AA seq
DB search
MENNRIKPVDVASELSTSFLDYSMSVIISRALPDVRDGLKPSQRRILYAMKELNLSPGGK
TRKCSKIVGDTMGNYHPHGDAAIYGTLVNMAQDWSMRDILVIGQGNFGTPDGDPPAAARY
TEAKLSGMGVALMADLDKDTVDFVPTYDNEHTEPTVFPSAFPNLLVNGGTGIAVGMATNM
PPHNLGEVVDGICAVIDNPHMTVEELRQYIKGPDFPTGGDVLGFSGIDNYFRTGRGSVRI
RGKIDMEVTDSGKDLLIIREVPYGVNRAALQERIAELYKDKILTDISGIRDLSDEKTCIE
IELKRDARPQVVMNQLYKLTSMETSFAVNMLAIHDNRPKTLAMMDAINFYIEHRREVVVR
RTRYLLGDAEKDAERLEAFLLALHHMDDFISIIRDSKNRDEARERLQNYTFSTQTAESLG
ILIRSQASIQGDRYVFTERQVNSILDLRLYQLTALENDKISGEYAELLVRIKDYLDILAN
ESRVLGIVKDELKAIKDKYATPRVTRIIPFSGDMAIEDLIPNDTMIVTITHSGYIKRTNS
AEYRVQARGGKGVKAATTRGAKKDAEADFIEHLFAAQNHDYLMFFTNTGRVYVDRVYEID
EAARSAQGRNIKNLLDLQPEEAIAAILRLERRVDEKGNDITFAEGSGNVVFATKDGTVKK
TSLNDFANYRKAGIIAINLEEGNSLVNAELTSGADEIVLVTHDGMSIRFPEEDLRTQGRN
TIGVRGIRPRAGDYVVALAIVDPQKTLLVASENGLGKRTSFDEYRTQGRGGTGIKTMNCT
DKTGKVVSATVVSDEDELMLMTTAGQSVRIKVATVRETGRATQGVKLMTLNEGESIQDIS
IVIPDDEDEEAPAETEDAGAGEVSGEMEAPAEE
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataatagaatcaaaccggtggatgtagccagtgagctctccacttctttcctg
gactactccatgtccgtcatcatctcccgcgccctgccggacgtgagagacggcctcaaa
ccttcccagcggcgcatcctgtacgccatgaaggaactcaatctgtcccctgggggcaag
acccgcaaatgctccaaaatcgtgggcgacacgatgggtaactaccaccctcacggggat
gccgccatttacggcaccctggtgaacatggcgcaggactggtccatgcgggatattctc
gtgatcggccagggcaacttcggcacgccggatggagacccccccgccgctgcccgatac
acggaagccaagctctccggcatgggcgtggccctgatggcggatttggacaaggacacc
gtggattttgttcccacatacgacaatgaacacacggaacccaccgtgtttccctccgct
ttcccaaaccttctggtgaacggcggcacggggattgccgtggggatggccaccaacatg
cctccgcacaacctgggggaagtggtggacggtatctgcgccgtgattgacaatccccac
atgactgtggaagagctgcgccagtacatcaaggggccggattttcccaccgggggcgac
gtgctgggcttttcaggcattgacaactacttccgcaccgggcgcggctccgtgcgcatc
cgcggcaagatagacatggaagtaacggattccggcaaggatcttctcatcatccgggaa
gtgccgtatggcgtgaaccgcgccgcccttcaggaacgcattgcggaactgtacaaggat
aaaatcctgacggatatttccggcatccgtgacctttccgatgagaaaacctgcattgaa
atcgagctgaagcgggatgcccgcccgcaggtggtcatgaaccagctttacaagctcacc
tccatggaaacttcctttgcggtgaatatgctggcgattcatgacaaccgccccaagacg
ctcgccatgatggacgccatcaacttctacatcgagcaccgccgcgaggtggtcgtgcgc
cgcacgcgctatctgctgggggatgcggagaaggatgccgagcgcctggaagccttcctg
ctggctctgcaccacatggatgacttcatttccattatccgggattccaaaaaccgggat
gaagcccgtgaacgcctgcagaattacacattctccacgcagacagcggaaagcctgggc
atcctgatccgttcccaggcctccatccagggggaccgctacgtcttcacggaacgccag
gtgaactccatcctggacctgcgcctgtaccagttgaccgccttggaaaacgacaagatt
tccggggaatacgcggaactgctggtccgcatcaaggactacctggatattctggcgaac
gaatcccgcgtgctgggcattgtaaaggacgaactgaaggcgattaaggacaagtacgcc
acgccgcgcgtcacgcgcatcattcccttctccggggatatggccattgaggatctcatc
ccgaatgacacgatgatcgtcaccatcacgcacagcggctacatcaagcgcaccaactcc
gcggaataccgcgtgcaggcgcgcgggggcaagggcgtgaaggctgccactaccagggga
gccaaaaaggatgcggaagcggactttatcgaacacctgttcgccgcccagaaccacgac
tacctgatgttctttacgaacaccgggcgcgtgtacgtggaccgcgtgtatgagattgac
gaagcggcgcgcagcgcgcagggtcgcaatatcaagaatctgctggatctccagccggaa
gaagccatcgctgccatcctgcgcctggaacgccgggtggatgaaaaaggcaatgacatt
acctttgcggaaggcagcggcaatgttgttttcgccacgaaggacggcacggtgaagaaa
accagcctgaacgatttcgccaactaccgcaaggccggcatcattgccattaatctggag
gaaggcaacagtctggtgaacgcggaacttaccagcggggccgatgaaatcgtgctcgtc
acgcatgacggcatgagcatccgcttcccggaagaagatctgcgtacgcagggccgcaac
accatcggtgttcgcggcatccgcccgcgggcgggggactacgttgtggccctggccatt
gtggacccgcagaaaaccctgctggtggcttctgaaaacggcctcggcaagcgcacttcc
tttgatgaataccgcacgcagggccgcggcggaaccggcatcaagaccatgaattgcacg
gataagaccggcaaggtggtttccgccacggtcgtgtctgatgaggacgagctgatgctg
atgaccacggccggacaatccgtccgcatcaaggtggcgaccgtgcgtgaaacgggccgc
gccacccagggcgtgaagctcatgacgctgaatgagggcgaatccatccaggacatttcc
atcgtcattcctgatgatgaagatgaagaagccccggcggaaacggaagacgcgggagcc
ggggaagtgtccggtgaaatggaagctccggcggaagaataa
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