Akkermansia muciniphila: Amuc_1408
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Entry
Amuc_1408 CDS
T00736
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
amu
Akkermansia muciniphila
Pathway
amu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Amuc_1408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amu03019
]
Amuc_1408
03110 Chaperones and folding catalysts [BR:
amu03110
]
Amuc_1408
03029 Mitochondrial biogenesis [BR:
amu03029
]
Amuc_1408
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amu04147
]
Amuc_1408
Enzymes [BR:
amu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Amuc_1408
Messenger RNA biogenesis [BR:
amu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Amuc_1408
Chaperones and folding catalysts [BR:
amu03110
]
Heat shock proteins
HSP60 / Chaperonin
Amuc_1408
Mitochondrial biogenesis [BR:
amu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Amuc_1408
Exosome [BR:
amu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Amuc_1408
Exosomal proteins of other body fluids (saliva and urine)
Amuc_1408
Exosomal proteins of breast cancer cells
Amuc_1408
Exosomal proteins of colorectal cancer cells
Amuc_1408
Exosomal proteins of bladder cancer cells
Amuc_1408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
REF
Motif
Other DBs
NCBI-ProteinID:
ACD05231
UniProt:
B2UKV8
LinkDB
All DBs
Position
1683318..1684970
Genome browser
AA seq
550 aa
AA seq
DB search
MAKQIQFDETARQALLRGVEQIAKAVKSTLGPAGRNVVIDKKFGSPLITKDGVTVAKEIE
LEDPFENMGAQLVREVSSKTNDVAGDGTTTATVLAESIYREGLRNVTAGANPISLQRGIM
KAADSVVEELKKISKPVDSSKEVAQVATVSANWDAEIGNIIAEAMDKVGKDGTITVEEAK
GIETTLDVVEGMQFDKGYLSPYFVTNAETMEAVLENPYILIHEKKINNLKDFLPLLEKVA
KSGRPFLVIAEDIEGEALATLVVNRLRGVLNICAVKAPGFGDRRKAMMEDIAILTGGKCI
TEDLGIKLENVGIEDLGQAKRVVVSKDETVIVEGSAKSSDIEARISQIRRQIKDTTSDYD
REKLQERLAKLAGGVAVIHVGAATETEMKEKKARVDDALHATRAAVEEGIVPGGGVALIR
AQKAIDTLKLEGDEATGAQIVYRAVEAPLRQLACNAGREGALIVANVKGMKNTAEGYNVA
TDKYEDLLSAGVVDPTKVTRSALQNAASIAGLLLTTECVIADKPEKKSCSCGSGASDMGG
MGGMGGMGMM
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacaaatccaatttgacgaaaccgcccgccaggctctgctccgcggcgtggaa
cagattgccaaggctgtcaagagcacgctgggccctgccggccgcaacgtagtgattgac
aaaaaattcggttcccccctcatcaccaaggacggcgtaaccgtggccaaggaaattgaa
ctggaagacccgtttgaaaacatgggcgcccagcttgtccgggaagtatcttccaaaacc
aatgacgtggccggcgacggcaccactaccgctaccgtgctggctgaaagcatttaccgc
gaaggcctgcgcaacgttactgccggggccaaccccatctccctccagaggggcatcatg
aaggctgcggattccgttgtggaagaactcaagaagatcagcaagcctgtcgactccagc
aaggaagtggcccaggtcgctaccgtctccgccaactgggacgctgaaatcggcaacatc
atcgcggaagccatggacaaggtgggcaaggacggcaccatcaccgtggaagaagccaag
ggcattgaaactacgctggacgtggtggaaggcatgcagtttgacaagggatacctgtcc
ccctacttcgtgacgaacgcggaaacgatggaagcggtgctggaaaacccctacatcctc
atccacgaaaagaaaatcaacaacctgaaggactttcttccgctgcttgaaaaagtggcc
aagagcggccgtcccttcctggtaatcgcggaagacattgaaggcgaagccctcgccacc
ctggtagtcaaccgtctgcgcggcgtgctgaacatctgcgcggtcaaggctcccggcttc
ggcgaccgccgcaaggccatgatggaagacatcgccatccttaccggcggcaagtgcatc
acggaagacctgggcatcaagctggaaaacgtgggcatcgaagacctcggccaggccaag
cgcgtggttgtttccaaggatgaaaccgttatcgtggaaggttccgccaaatcttccgat
attgaagcccgcatttcccagattcgccgccagatcaaggacaccacgtccgactacgac
cgcgaaaaactccaggaacgcctggccaagctggccggcggtgtggccgtcatccatgtg
ggtgccgctacggaaacggaaatgaaggaaaagaaggcccgtgtggacgacgccctgcac
gctacccgcgctgcggtggaagaaggcatcgttcccggcggcggcgtggcgctgattcgc
gcccagaaagccattgacaccctcaaactggaaggtgatgaagcaaccggcgcccagatc
gtttatcgcgctgtggaagccccgctccgccagctggcctgcaatgccggccgcgaagga
gccctcatcgtcgccaacgtgaaaggcatgaagaatactgccgaaggttacaacgtggcc
acggacaagtatgaagacctgctttccgccggcgtggtggatccgaccaaggtgacccgt
tccgctctgcagaatgcggcctccatcgccggcctgctgcttaccacggaatgcgtcatt
gccgacaagcccgagaagaagagctgcagctgcggctccggagcttccgacatgggcggc
atgggaggaatgggcggcatgggcatgatgtaa
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