Akkermansia muciniphila: Amuc_1452
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Entry
Amuc_1452 CDS
T00736
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
amu
Akkermansia muciniphila
Pathway
amu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
amu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Amuc_1452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amu03400
]
Amuc_1452
DNA repair and recombination proteins [BR:
amu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Amuc_1452
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Amuc_1452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_inter
AAA_21
SMC_N
nSTAND1
AAA_23
AAA_29
RsgA_GTPase
AAA_16
AAA_25
AAA_33
DnaJ_CXXCXGXG
AAA_15
RNA12
DUF4350
BCA_ABC_TP_C
Anti-TRAP
Guanylate_kin
cobW
Motif
Other DBs
NCBI-ProteinID:
ACD05274
UniProt:
B2UL01
LinkDB
All DBs
Position
complement(1743347..1745848)
Genome browser
AA seq
833 aa
AA seq
DB search
MNLPISIRGARQHNLRNLNLDLPSNKLIVFCGPSGSGKSSLAFDTLFSESRRRFLDCLSA
RSRQGMDQPEKPEVDSITGLPPALCLEQSARQQSSRTLLGSITEILDYLRILYAAAGTPH
DPETGKELERKSPDRITEELVSLPEHTRLILTAPAENLLAQDPAATLADFQRQGFLRVYW
NGEMRDIEEISSPVPPPPDAALVIDRLIVRGENTASRIADSLQTALRINPDEVRAIITIP
GEEASIRAFHTRYRNPETGFLLPQLTPRHFSFNSPLGACPSCRGTGLNEQENGPCRACGG
QRLSPLALAVTMPAPDRAYNLAELTALPLEDMAGELERLKTPPSLAAALTPLMEEINKRV
RFLNELGLSYLSLDRQANTLSGGELQRARLASQLGGGLSGVLYILDEPTAGLHPADTDRL
LRALRTLRNQGNTVLVVEHDEQILTAADHLVDMGPGSGTNGGRILAQGSLAEILGNSGSP
TGEWLSGKRNMPASGRKTAPAGRLVLTGADKHNLNNVTLNIPVGTLTCISGPSGSGKSTL
VRDCLIPAVRQDLSGKKGIPRRVQGTEHFNRLVVIDQSPIGKTPRSTPATATGLLQVLRP
LYAQLPLSKQRGYTAARFSPNIRGGRCERCQGTGMIEVDMNFLGNVAMPCDACQGQCYNR
ETLEVTWKGKSIAQALALTVDEAAEFFSSLPRAAAILKSMQDVGLGYLNLNRRADTLSGG
ESQRIKIAAELAKAPAWKLEEDGKRALFILDEPTSGLHFNEVALLLAALFRLRDAGHTIL
CVEHHKDLLNAADYLVDMGPGAGRHGGNIVAEGSPADVASNPEAPTSPWLVPR
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttcccatctccatccgcggcgcgcgccagcacaacctccggaacctgaatctg
gatcttccgtccaacaagctcatcgtattctgcggcccttccggctccggaaaatcttcc
ctggcgtttgatacgcttttttccgaatcccgcaggcgttttctggactgcctgtcggca
cgctccaggcagggcatggatcaaccggaaaaaccggaagtggacagcattaccgggctg
cccccggccctgtgcctggagcaatccgccaggcagcagagttcccgcaccctgctgggg
agcatcacggaaattctggactacctgcgcatcctttacgcggctgccggcacgccccat
gacccggagacaggaaaggaactggaacgcaagagcccggaccggattacggaagaactc
gtttccctgccggaacacacgcgcctgattctgaccgctccggcggaaaacctgctggcc
caggatcccgcagcgacgctggccgacttccagcggcagggcttcctccgggtttactgg
aacggagaaatgcgggatattgaagaaataagttcccccgtccccccgcctccagacgcg
gccctggtcattgaccgcctcatcgtcagaggggaaaatacggcctcgcgcattgcggat
tccctgcaaacggctctccgtatcaatccggacgaggtgcgggccatcatcaccataccg
ggagaggaagcctcaatccgggccttccacacccgctaccgcaatccggaaacaggcttc
cttctgccccagcttacgccccgccatttttccttcaactccccgctgggggcatgcccc
tcctgccggggaaccggcctgaatgaacaggaaaacggtccgtgccgcgcctgcggaggc
cagcgtctttcccctctggccctggccgtcaccatgcctgcgccggaccgggcctacaat
ctcgcggaactgacggctcttcctctggaagatatggcaggagaactggaacgactgaaa
acgcccccctccctggcggcggcattgaccccgctcatggaggaaatcaacaaacgcgtg
cgcttcctgaatgagctgggactctcctacctgtccctggaccgccaggcaaacaccctc
tccggaggcgaactgcagagggcgcgcctggcttcccagctgggaggcggcctttccgga
gtcctttacatcctggacgaacccacggccggactgcaccccgccgatacggaccgcctg
ctccgcgctctccggacgctccggaaccagggcaacacagtactggtcgtagagcatgat
gaacaaattctaaccgcggcggatcacctggtggacatgggccccggctccggaaccaac
ggaggccgtattctggcgcagggctcccttgctgagatactgggaaattcaggaagcccc
accggggaatggctttcaggcaagcgaaacatgcccgcctccggacgcaagacggctcct
gcggggcgtctggtactgaccggtgcggacaagcacaacctcaacaacgtcactctgaat
atcccggtcggcacactgacctgcatctccggcccttccggttcagggaaatccaccctt
gtccgggactgcctcatccccgcagtcaggcaagatctctccgggaaaaagggtattccg
cgccgcgtgcagggaacggaacacttcaaccgcctcgtcgtcatcgaccagtcgcccatc
ggcaaaacgccgcgctccacaccggccaccgctaccggcctgctccaggtgctgcgcccc
ctttacgcacagctccccctttccaagcagaggggatatacggcggcgcgcttttccccc
aacattcgcggaggccgctgtgaacggtgccagggaacgggcatgattgaagtggacatg
aactttctgggaaacgtggcaatgccctgcgacgcctgccaggggcagtgctacaacagg
gaaacgctggaagtcacctggaaagggaaatccattgcccaggcgctggccctgaccgtg
gacgaagcggcggaattcttttcctccctgcccagagccgccgccatcctgaaaagcatg
caggacgtagggctgggatacctcaatctcaaccgcagggcggacaccctttccggcgga
gaatcccagcgcataaaaatagctgcggaactggccaaagccccggcctggaaactggag
gaagacgggaaacgggccctgttcattctggacgaacccaccagcggcctccacttcaat
gaagtggcccttctcctggcagcccttttccgcctgagggatgccggacacaccatcctc
tgcgtggaacaccacaaggacctgctcaatgccgcggactacctggtggacatgggcccc
ggagccggcaggcacggcggcaatatcgtggccgagggctcccccgcagatgtagcgtcc
aatccggaagcgcccacttctccctggctcgtcccccgttaa
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